RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 A730009L09RikA0A1B0GS82 72 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Inafm1E9PV59 130 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Igkv8-27A0A0G2JF28 120 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Znf575Q3TXZ1 239 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ntn5Q3UQ22 452 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Trav13d-1A0A075B606 110 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 B230359F08RikA0A0B4J1K3 109 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 P01820 115 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Sptan1P16546 2472 aaKnown RBP4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm10160F6Y577 67 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Sprr3O09116 238 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 P04944 107 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Rpl39P62892 51 aa4.27□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 P01823 113 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Prp2P05143 317 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm16485Q8C4B7 115 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Lrrk1Q3UHC2 2014 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Frem1Q684R7 2191 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Fhl3Q9R059 289 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 E130116L18RikQ8BMV6 101 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ly6hQ9WUC3 139 aa4.26□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Defb40Q70KL2 73 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Mapk1ip1lQ8BH93 242 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ighv2-6-8A0A0A6YWY9 116 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 9230109A22RikQ8BHE6 111 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm9958Q8C9U4 106 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Arfgef3Q3UGY8 2170 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 KalrnA2CG49 2964 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 CriptO70333 101 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm16503Q8C6M9 103 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Myo9bQ9QY06 2114 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ighv1-12A0A0A6YXJ9 117 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm20708H3BKF4 155 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Q9CX25 107 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Snai3Q9QY31 287 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Sorl1O88307 2215 aaKnown RBP4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Trav13-4-dv7A0A075B6C2 110 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Trbv13-2A0A140T8N6 113 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 OdaphJ3QNT8 126 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 P01748 117 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Cox6a2P43023 97 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Pla2g10Q9QXX3 151 aa4.25□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Med13Q5SWW4 2171 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Greb1Q3UHK3 1954 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm10226O88253 85 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Spag11Q8K4N2 71 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm20661K7N787 53 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 P01674 108 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Elof1P60003 83 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Chchd10Q7TNL9 138 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm17324Q8C6J8 137 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ighv2-2A0A075B5P8 116 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ovol3D3YYM0 189 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm10542F6XDR3 90 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 U90926O08546 118 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Defb2P82020 71 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 P84751 237 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 A530084C06RikQ3UTW2 186 aa4.24□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Heatr5aQ5PRF0 2038 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ighv1-53A0A075B5W3 117 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 NpbQ8K4P1 119 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Tcte2E9PY37 120 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Brwd1Q921C3 2304 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ighv8-13A0A075B5Y0 101 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 BC107364E9Q5A2 140 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ncor1Q60974 2453 aa4.23□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Fgfbp3Q1HCM0 245 aa4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Prr12E9PYL2 2035 aaKnown RBP4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Trip12G5E870 2025 aaKnown RBP4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Defb38Q7TNV7 63 aa4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Usf3B2RUQ2 2221 aa4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Camk2n1Q6QWF9 78 aa4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Defb10Q8R2I8 73 aa4.22□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm19410A0A140LJC7 2098 aa4.21□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Gm5617Q91VN2 117 aa4.21□□□□□ -1.73
Pcdh9-202ENSMUST00000192221 Ighv1-59A0A0A6YXE0 117 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Trbv13-1A0A0B4J1P8 112 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Q8BGJ3 129 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 4930507D05RikQ8C9C9 103 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Prh1P05142 261 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Shisa2Q8QZV2 295 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 LitafQ9JLJ0 161 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Gm5629P06327 117 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Wfdc15aQ8BH89 80 aa4.21□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Ighv2-9A0A075B5Q5 116 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Spry2Q9QXV8 315 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Gm12057A0A087WR21 115 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 4930556J24RikQ9D4U7 146 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Dock9Q8BIK4 2055 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Fhl2O70433 279 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Smr3aQ61900 147 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Krtap16-1A2A5X5 502 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Gm10322F7D7I4 111 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Prok1Q14A28 105 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Wfdc17Q5SSJ1 76 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Znrd1Q791N7 123 aa4.2□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Crybg1A0A0G2JG52 2065 aa4.19□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Gm10845Q3UNY9 185 aa4.19□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 Cdc42se1Q8BHL7 80 aa4.19□□□□□ -1.74
Pcdh9-202ENSMUST00000192221 SycnQ8VCK7 134 aa4.19□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 154.9 ms