RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Gm21748Q3UE70 102 aa7.72□□□□□ -1.17
Col6a3-201ENSMUST00000056925 Crip3Q6Q6R3 243 aa7.72□□□□□ -1.17
Col6a3-201ENSMUST00000056925 Coa6Q8BGD8 79 aa7.72□□□□□ -1.17
Col6a3-201ENSMUST00000056925 TshbP12656 138 aa7.72□□□□□ -1.17
Col6a3-201ENSMUST00000056925 P01747 120 aa7.72□□□□□ -1.17
Col6a3-201ENSMUST00000056925 Gm9958Q8C9U4 106 aa7.72□□□□□ -1.17
Col6a3-201ENSMUST00000056925 Gm10647E9Q8X0 124 aa7.71□□□□□ -1.17
Col6a3-201ENSMUST00000056925 Rpl28P41105 137 aaKnown RBP7.71□□□□□ -1.17
Col6a3-201ENSMUST00000056925 Gm10197F6QEY5 67 aa7.71□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gm10135F6TEE5 83 aa7.71□□□□□ -1.18
Col6a3-201ENSMUST00000056925 E030018B13RikJ3QMS9 113 aa7.71□□□□□ -1.18
Col6a3-201ENSMUST00000056925 P01643 108 aa7.71□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Ighv1-72P01751 139 aa7.71□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Ighv3-3A0A0A6YWL2 116 aa7.7□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gm20708H3BKF4 155 aa7.7□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gphb5Q812B2 130 aa7.7□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Ly6gP35461 111 aa7.7□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Dmbt1Q60997 2085 aa7.69□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Q8K1L6 76 aa7.69□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Ly6g6dQ9Z1Q3 135 aa7.69□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Defb38Q7TNV7 63 aa7.68□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Fhl1P97447 280 aaKnown RBP7.68□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gm10322F7D7I4 111 aa7.68□□□□□ -1.18
Col6a3-201ENSMUST00000056925 P01659 112 aa7.68□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Fgfbp3Q1HCM0 245 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 PlaurP35456 327 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gm12216A0A1W2P827 62 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Epg5Q80TA9 2572 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Myo18bE9PV66 2605 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Krtap16-1A2A5X5 502 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Pip4p1Q3TWL2 284 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Zfand3Q497H0 227 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Pla2g2eQ9QUL3 142 aa7.67□□□□□ -1.18
Col6a3-201ENSMUST00000056925 TrrapQ80YV3 2565 aaKnown RBP7.66□□□□□ -1.18
Col6a3-201ENSMUST00000056925 P01755 137 aa7.66□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Rnase1P00683 149 aa7.66□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gm16223Q8CBM3 117 aa7.66□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Gm9887F6RFI0 207 aa7.66□□□□□ -1.18
Col6a3-201ENSMUST00000056925 Znf239P24399 201 aa7.65□□□□□ -1.18
Col6a3-201ENSMUST00000056925 NrgnP60761 78 aa7.64□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Defb37Q7TMD2 62 aa7.64□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Col4a6B1AVK5 1691 aa7.64□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Znf706Q9D115 76 aaKnown RBP7.64□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Wfdc6bF6ULY1 148 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 4930556J24RikQ9D4U7 146 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 CnfnQ6PCW6 111 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Znf414Q9DCK4 299 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Chd8Q09XV5 2582 aaKnown RBP7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Dazap2Q9DCP9 168 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Crip2Q9DCT8 208 aaKnown RBP7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Mp68P56379 58 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 SbsponQ3UPR9 264 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Wfdc12Q9JHY3 85 aa7.63□□□□□ -1.19
Col6a3-201ENSMUST00000056925 9130230L23RikQ8CC80 163 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 4930519P11RikQ9CUJ8 166 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Wfdc13Q5DQQ6 81 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Ighv1-59A0A0A6YXE0 117 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Gm10845Q3UNY9 185 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 CstadQ9D245 104 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Ighv1-66A0A075B5X5 117 aa7.62□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Gm5142Q8C5X9 133 aa7.61□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Limd2Q8BGB5 128 aa7.61□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Ankrd11E9Q4F7 2643 aa7.61□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Wfdc15aQ8BH89 80 aa7.6□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Sprr3O09116 238 aa7.6□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Col5a1O88207 1838 aa7.6□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Q9CX25 107 aa7.6□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Ovol3D3YYM0 189 aa7.59□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Gm10643Q3URG9 111 aa7.59□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Gm4707V9GXN5 68 aa7.59□□□□□ -1.19
Col6a3-201ENSMUST00000056925 P06329 120 aa7.59□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Polr2kQ63871 58 aa7.59□□□□□ -1.19
Col6a3-201ENSMUST00000056925 Col4a5Q63ZW6 1691 aa7.59□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Ighv2-5A0A0A6YY69 116 aa7.58□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Ighv2-3A0A075B696 115 aa7.58□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Gm10549Q3URY4 149 aa7.58□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Defb18Q30KP5 85 aa7.57□□□□□ -1.2
Col6a3-201ENSMUST00000056925 RetnlbQ99P86 105 aa7.57□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Fam19a3Q7TPG6 132 aa7.57□□□□□ -1.2
Col6a3-201ENSMUST00000056925 C130032M10RikQ8C888 123 aa7.57□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Cep192E9Q4Y4 2514 aaKnown RBP7.56□□□□□ -1.2
Col6a3-201ENSMUST00000056925 A0A286YCN5 57 aa7.56□□□□□ -1.2
Col6a3-201ENSMUST00000056925 E130114P18RikF6S0S7 154 aa7.55□□□□□ -1.2
Col6a3-201ENSMUST00000056925 6430550D23RikE9Q1X6 194 aa7.55□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Gm10160F6Y577 67 aa7.55□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Usp24B1AY13 2617 aaKnown RBP7.55□□□□□ -1.2
Col6a3-201ENSMUST00000056925 U90926O08546 118 aa7.55□□□□□ -1.2
Col6a3-201ENSMUST00000056925 2310034G01RikA0A286YDL3 209 aa7.54□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Igkv8-28A0A0G2JE47 121 aa7.54□□□□□ -1.2
Col6a3-201ENSMUST00000056925 PscaP57096 123 aa7.54□□□□□ -1.2
Col6a3-201ENSMUST00000056925 A730009L09RikA0A1B0GS82 72 aa7.54□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Cdc42se1Q8BHL7 80 aa7.54□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Gm9913Q8BQQ2 135 aa7.53□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Ighv1-56A0A0A6YXG2 117 aa7.53□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Chchd7Q8K2Q5 85 aa7.53□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Piezo1E2JF22 2547 aa7.53□□□□□ -1.2
Col6a3-201ENSMUST00000056925 Gm10490F6VBM2 120 aa7.52□□□□□ -1.21
Col6a3-201ENSMUST00000056925 Gm10509O88255 85 aa7.52□□□□□ -1.21
Col6a3-201ENSMUST00000056925 Gpha2Q925Q5 128 aa7.52□□□□□ -1.21
Col6a3-201ENSMUST00000056925 SycnQ8VCK7 134 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 73.8 ms