RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Defa16P50714 93 aa13.68□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 4930556J24RikQ9D4U7 146 aa13.68□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Q9D727 114 aa13.68□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 P0C913 63 aa13.67□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Josd1Q9DBJ6 202 aa13.67□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Trav13-4-dv7A0A075B6C2 110 aa13.67□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Hspb8Q9JK92 196 aa13.67□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Tmem238A9JSM3 176 aa13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 P01896 185 aa13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Fgf6P21658 208 aa13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Ndufa12Q7TMF3 145 aaKnown RBP13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Mpv17l2Q8VIK2 200 aa13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Tspo2Q9CRZ8 162 aa13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Srsf9Q9D0B0 222 aaKnown RBP13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Tax1bp3Q9DBG9 124 aa13.66□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Ighv2-9A0A075B5Q5 116 aa13.65□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Ndufa1O35683 70 aa13.65□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Ss18l2Q9D174 77 aa13.65□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 ApobE9Q414 4505 aa13.65□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Gm10837Q3UTT8 145 aa13.64□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Ndufc2Q9CQ54 120 aa13.64□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Dnah8Q91XQ0 4731 aa13.64□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Herc2Q4U2R1 4836 aa13.63□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Igkv3-12A0A140T8P0 119 aa13.63□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Mfap4Q9D1H9 257 aa13.62□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 LeprotO89013 131 aa13.61□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 9430069I07RikQ9CX21 111 aa13.61□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Kmt2cQ8BRH4 4903 aa13.61□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 Fam104aA2A6P4 185 aa13.61□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 CnbpP53996 178 aaKnown RBP13.6□□□□□ -0.23
Ssbp4-201ENSMUST00000049908 ScxQ64124 207 aa13.58□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Prss58Q8BW11 241 aa13.58□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Tmem97Q8VD00 176 aa13.58□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Q9DAA3 117 aa13.58□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Zfand2aQ9JII7 171 aa13.58□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Gm45717A0A1B0GT68 152 aa13.57□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Gm28305F6U473 122 aa13.57□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 AponG3X9D6 251 aa13.57□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Ighv1-62-1A0A075B5U3 116 aa13.56□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Igkv4-92A0A0B4J1I2 117 aa13.56□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Brd3osA0A1B0GRB6 84 aa13.56□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Trappc1Q5NCF2 145 aa13.56□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Trav11A0A0B4J1J9 114 aa13.55□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 CrxO54751 299 aa13.55□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Birc6O88738 4882 aa13.55□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Ube2wQ8VDW4 151 aa13.55□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Gatd1Q8BFQ8 220 aa13.54□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Gm4064A0A087WR82 380 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Ighv1-56A0A0A6YXG2 117 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Gm10352B2RWR6 380 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Rbmy1a1O35698 380 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Bsph2Q0Q236 131 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 Rbmy1bQ60990 380 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 1700012A03RikQ9DAF1 130 aa13.53□□□□□ -0.24
Ssbp4-201ENSMUST00000049908 P01823 113 aa13.52□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Gpx1P11352 201 aa13.52□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Cited1P97769 203 aa13.52□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Fgf23Q9EPC2 251 aa13.52□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 4930519P11RikQ9CUJ8 166 aa13.51□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Foxi2Q3I5G5 311 aa13.5□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Gm10604Q3V0X7 143 aa13.5□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Ube2v1Q9CZY3 147 aa13.5□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Igkv8-24A0A140T8P5 121 aa13.49□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Inafm2A0A1L1STD6 152 aa13.49□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Defa9P50707 93 aa13.49□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Cox7b2Q9D2H1 82 aa13.49□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Vps13bQ80TY5 3993 aa13.49□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Fam240aJ3QNP9 97 aa13.48□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Tmem86bQ497J1 226 aa13.48□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Hnrnpa3Q8BG05 379 aaKnown RBP13.48□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Mustn1Q99JI1 82 aa13.48□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 Sprr4Q8CGN8 76 aa13.46□□□□□ -0.25
Ssbp4-201ENSMUST00000049908 A730009L09RikA0A1B0GS82 72 aa13.45□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Cox8cA6H666 72 aa13.45□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 P01837 106 aa13.45□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Ca1P13634 261 aa13.45□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Cks1bP61025 79 aa13.45□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Trav8-1A0A075B641 109 aa13.44□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Gm10735Q3US96 136 aa13.44□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Vmn1r197Q8R265 298 aa13.44□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Ighv1-62-2A0A0A6YXZ4 119 aa13.43□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Hbb-bsA8DUK4 147 aa13.43□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Hbb-b1P02088 147 aa13.43□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Smr3aQ61900 147 aa13.43□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Defb50Q6TU36 73 aa13.43□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Hrct1Q9D6B9 109 aa13.43□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Defa10P50708 93 aa13.42□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Sprr1aQ62266 144 aa13.42□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Gm20730A0A075B5J6 119 aa13.42□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 S100a8P27005 89 aa13.41□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Cks1brtQ3UNC9 96 aa13.41□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 PpdpfQ9CR37 115 aa13.41□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Gm9242J3QNY1 357 aa13.4□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Camk2n2Q78WH7 79 aa13.4□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Prelid3aQ8VE85 172 aa13.4□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 1600014C23RikQ9DAX4 101 aa13.4□□□□□ -0.26
Ssbp4-201ENSMUST00000049908 Kiaa1109A2AAE1 5005 aa13.39□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Tal2Q62282 108 aa13.39□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Defa22Q8C1N8 93 aa13.39□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Igkv3-2A0A075B5P0 119 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 114 ms