RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Tmem238A9JSM3 176 aa10.58□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm11444F6QMA6 170 aa10.58□□□□□ -0.72
Trim54-202ENSMUST00000202769 Atxn7l1Q9CZ05 146 aa10.58□□□□□ -0.72
Trim54-202ENSMUST00000202769 Trav12d-3A0A075B6A4 115 aa10.57□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm20379A0A087WR34 119 aa10.57□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm9047B9EJX3 177 aa10.57□□□□□ -0.72
Trim54-202ENSMUST00000202769 Tmem223Q9CQE2 199 aaKnown RBP10.57□□□□□ -0.72
Trim54-202ENSMUST00000202769 Defa10P50708 93 aa10.56□□□□□ -0.72
Trim54-202ENSMUST00000202769 Ifitm1Q9D103 106 aa10.56□□□□□ -0.72
Trim54-202ENSMUST00000202769 Fam241bQ9D882 120 aa10.56□□□□□ -0.72
Trim54-202ENSMUST00000202769 MNCb-2875Q9DCB3 74 aa10.56□□□□□ -0.72
Trim54-202ENSMUST00000202769 Zfp930A0A1D5RM15 441 aa10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm10065F6TJM2 114 aa10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 Krtap19-5O08632 62 aa10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 SnrpeP62305 92 aaKnown RBP10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm9747Q810H1 104 aa10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 SpinklQ8CEK3 90 aa10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 Map1lc3aQ91VR7 121 aa10.55□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm45623A0A1B0GSF6 103 aa10.54□□□□□ -0.72
Trim54-202ENSMUST00000202769 Gm18596A0A1W2P860 280 aa10.54□□□□□ -0.72
Trim54-202ENSMUST00000202769 Ighv1-72P01751 139 aa10.54□□□□□ -0.72
Trim54-202ENSMUST00000202769 P01896 185 aa10.54□□□□□ -0.72
Trim54-202ENSMUST00000202769 Defa9P50707 93 aa10.54□□□□□ -0.72
Trim54-202ENSMUST00000202769 Fat3Q8BNA6 4555 aa10.53□□□□□ -0.72
Trim54-202ENSMUST00000202769 Igkv3-2A0A075B5P0 119 aa10.53□□□□□ -0.72
Trim54-202ENSMUST00000202769 Tfpi2O35536 230 aa10.53□□□□□ -0.72
Trim54-202ENSMUST00000202769 FcorP0DJI6 106 aa10.53□□□□□ -0.72
Trim54-202ENSMUST00000202769 Arl14eplQ3UKZ7 152 aa10.53□□□□□ -0.72
Trim54-202ENSMUST00000202769 Mycbp2Q7TPH6 4711 aa10.52□□□□□ -0.72
Trim54-202ENSMUST00000202769 Krtap29-1A2A5X4 342 aa10.52□□□□□ -0.73
Trim54-202ENSMUST00000202769 CebpgP53568 150 aa10.52□□□□□ -0.73
Trim54-202ENSMUST00000202769 SeboxP70368 190 aa10.52□□□□□ -0.73
Trim54-202ENSMUST00000202769 9130204L05RikG3UWB8 92 aa10.51□□□□□ -0.73
Trim54-202ENSMUST00000202769 BB014433Q8C5R5 389 aa10.51□□□□□ -0.73
Trim54-202ENSMUST00000202769 Gpr15lA0A0B4J1N3 78 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 4930546C10RikE9Q4Y3 121 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Shisal1Q0VBP7 198 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Gm10735Q3US96 136 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Fam19a4Q7TPG5 135 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Chchd1Q9CQA6 118 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Sertad4A7DTG3 377 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Gm21693J3QK27 380 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Olfr983Q8VG90 315 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Znf414Q9DCK4 299 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Lamtor2Q9JHS3 125 aa10.5□□□□□ -0.73
Trim54-202ENSMUST00000202769 Ifitm10Q8BR26 201 aa10.49□□□□□ -0.73
Trim54-202ENSMUST00000202769 Gm5426J3QNM7 103 aa10.48□□□□□ -0.73
Trim54-202ENSMUST00000202769 Trav14n-2A0A0G2JDF5 121 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Trav13d-4A0A0G2JFX3 110 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Gm10542F6XDR3 90 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Vpreb2P13373 142 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Sprr1aQ62266 144 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Sprr1bQ62267 153 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Hist3h2bbQ8CGP0 126 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Ormdl2Q9CQZ0 153 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Hist3h2baQ9D2U9 126 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Ramp1Q9WTJ5 148 aa10.47□□□□□ -0.73
Trim54-202ENSMUST00000202769 Herc1E9PZP8 4859 aa10.46□□□□□ -0.73
Trim54-202ENSMUST00000202769 Trav14-2A0A075B694 121 aa10.46□□□□□ -0.74
Trim54-202ENSMUST00000202769 Esp34G3UXG0 151 aa10.46□□□□□ -0.74
Trim54-202ENSMUST00000202769 BC025920Q3US60 128 aa10.46□□□□□ -0.74
Trim54-202ENSMUST00000202769 SycnQ8VCK7 134 aa10.46□□□□□ -0.74
Trim54-202ENSMUST00000202769 RetnlbQ99P86 105 aa10.46□□□□□ -0.74
Trim54-202ENSMUST00000202769 Rpl36-ps4A0A140T8U4 117 aa10.45□□□□□ -0.74
Trim54-202ENSMUST00000202769 Fgf6P21658 208 aa10.45□□□□□ -0.74
Trim54-202ENSMUST00000202769 Mrpl32Q9DCI9 187 aaKnown RBP10.45□□□□□ -0.74
Trim54-202ENSMUST00000202769 Rab24P35290 203 aa10.43□□□□□ -0.74
Trim54-202ENSMUST00000202769 Lrp1Q91ZX7 4545 aaKnown RBP10.43□□□□□ -0.74
Trim54-202ENSMUST00000202769 Lrp1bQ9JI18 4599 aa10.43□□□□□ -0.74
Trim54-202ENSMUST00000202769 Defa23Q5G866 93 aa10.42□□□□□ -0.74
Trim54-202ENSMUST00000202769 Trdv2-1A0A0G2JGB9 116 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 A730009L09RikA0A1B0GS82 72 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 TbpP29037 316 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Sprr4Q8CGN8 76 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Cited4Q9WUL8 182 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Timm10bQ9WV96 100 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Trav13-4-dv7A0A075B6C2 110 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Grcc10O35127 126 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 PkigO70139 76 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Hist1h2bfP10853 126 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Ube2d1P61080 147 aaKnown RBP10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Rpl37aP61514 92 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Hist1h2bbQ64475 126 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Hist1h2bkQ8CGP1 126 aaKnown RBP10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Hist1h2bpQ8CGP2 126 aaKnown RBP10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Leprotl1Q9CQ74 131 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Mfap4Q9D1H9 257 aa10.41□□□□□ -0.74
Trim54-202ENSMUST00000202769 Gm42420A0A0J9YUQ2 99 aa10.4□□□□□ -0.75
Trim54-202ENSMUST00000202769 Fabp4P04117 132 aa10.4□□□□□ -0.75
Trim54-202ENSMUST00000202769 Cox7b2Q9D2H1 82 aa10.4□□□□□ -0.75
Trim54-202ENSMUST00000202769 Higd1aQ9JLR9 95 aa10.4□□□□□ -0.75
Trim54-202ENSMUST00000202769 Fat2Q5F226 4351 aa10.39□□□□□ -0.75
Trim54-202ENSMUST00000202769 Tmem238lA0A1B0GS74 79 aa10.39□□□□□ -0.75
Trim54-202ENSMUST00000202769 Tmem136Q3TYE7 245 aa10.39□□□□□ -0.75
Trim54-202ENSMUST00000202769 SmagpQ99KC7 97 aa10.38□□□□□ -0.75
Trim54-202ENSMUST00000202769 Hrct1Q9D6B9 109 aa10.38□□□□□ -0.75
Trim54-202ENSMUST00000202769 Ighv1-56A0A0A6YXG2 117 aa10.37□□□□□ -0.75
Trim54-202ENSMUST00000202769 Igf1P05017 153 aa10.37□□□□□ -0.75
Trim54-202ENSMUST00000202769 Gm10842Q3U587 122 aa10.37□□□□□ -0.75
Trim54-202ENSMUST00000202769 Q3UNZ8 350 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms