RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 P01745 121 aa11.47□□□□□ -0.57
Upf1-202ENSMUST00000215817 Rbmy1bQ60990 380 aa11.47□□□□□ -0.57
Upf1-202ENSMUST00000215817 Psmb8P28063 276 aa11.47□□□□□ -0.57
Upf1-202ENSMUST00000215817 Mrpl52Q9D0Y8 121 aa11.47□□□□□ -0.57
Upf1-202ENSMUST00000215817 Prp2P05143 317 aa11.47□□□□□ -0.57
Upf1-202ENSMUST00000215817 P84751 237 aa11.46□□□□□ -0.57
Upf1-202ENSMUST00000215817 Sdhaf1Q3U276 118 aa11.46□□□□□ -0.57
Upf1-202ENSMUST00000215817 BC107364E9Q5A2 140 aa11.46□□□□□ -0.57
Upf1-202ENSMUST00000215817 A130051J06RikQ8CAU1 227 aa11.46□□□□□ -0.57
Upf1-202ENSMUST00000215817 Gm20499D3Z4G5 72 aa11.46□□□□□ -0.58
Upf1-202ENSMUST00000215817 Ang3P97802 145 aa11.46□□□□□ -0.58
Upf1-202ENSMUST00000215817 Rasl10aQ8K5A4 203 aa11.46□□□□□ -0.58
Upf1-202ENSMUST00000215817 Trbv13-1A0A0B4J1P8 112 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Gm5464Q3UY29 175 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Iglc1A0A0G2JE99 106 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 P01843 105 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Foxc1Q61572 553 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Cd99Q8VCN6 175 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Mustn1Q99JI1 82 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Ndufs7Q9DC70 224 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Gm17359A0A0G2JEB7 487 aa11.45□□□□□ -0.58
Upf1-202ENSMUST00000215817 Q99M08 65 aa11.44□□□□□ -0.58
Upf1-202ENSMUST00000215817 1520401A03RikA0A0J9YVH6 598 aa11.44□□□□□ -0.58
Upf1-202ENSMUST00000215817 NpyP57774 97 aa11.44□□□□□ -0.58
Upf1-202ENSMUST00000215817 Olfr312Q7TRZ9 308 aa11.44□□□□□ -0.58
Upf1-202ENSMUST00000215817 Gm5878E9PUB3 99 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 BtcQ05928 177 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 Chd6A3KFM7 2711 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 Trav14d-1A0A075B6B1 121 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 Cox7a1P56392 80 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 Trav13d-1A0A075B606 110 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 Prh1P05142 261 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 AW146154Q3TPQ7 468 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 Odf1Q61999 247 aa11.43□□□□□ -0.58
Upf1-202ENSMUST00000215817 P01747 120 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Olfr311Q5NC59 308 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Gatd1Q8BFQ8 220 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Q9D8Q6 235 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Odf3Q920N1 254 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Atp5g3P56384 141 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Atp5g1Q9CR84 136 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Fam216aQ9DB54 251 aa11.42□□□□□ -0.58
Upf1-202ENSMUST00000215817 Tmem243B2RVB9 118 aa11.41□□□□□ -0.58
Upf1-202ENSMUST00000215817 Ebi3O35228 228 aa11.41□□□□□ -0.58
Upf1-202ENSMUST00000215817 P0C913 63 aa11.41□□□□□ -0.58
Upf1-202ENSMUST00000215817 Defb47Q30KN1 79 aa11.41□□□□□ -0.58
Upf1-202ENSMUST00000215817 Lypd6Q8BPP5 171 aa11.41□□□□□ -0.58
Upf1-202ENSMUST00000215817 A930009A15RikG3UYI6 118 aa11.41□□□□□ -0.58
Upf1-202ENSMUST00000215817 Tmem14cQ9CQN6 114 aa11.4□□□□□ -0.58
Upf1-202ENSMUST00000215817 Nbeal2Q6ZQA0 2742 aa11.4□□□□□ -0.58
Upf1-202ENSMUST00000215817 Lect2O88803 151 aa11.4□□□□□ -0.58
Upf1-202ENSMUST00000215817 Igkv2-137A0A0B4J1H6 120 aa11.4□□□□□ -0.58
Upf1-202ENSMUST00000215817 P06328 117 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 Znf239P24399 201 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 Ndufa4Q62425 82 aaKnown RBP11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 March3Q8BRX9 218 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 Spry2Q9QXV8 315 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 Gm3443F7CCV5 94 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 Gm904Q3V2L5 102 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 Gm15294V9GXA7 121 aa11.39□□□□□ -0.59
Upf1-202ENSMUST00000215817 PrcdQ00LT2 53 aa11.38□□□□□ -0.59
Upf1-202ENSMUST00000215817 TroQ6DIC6 2087 aa11.38□□□□□ -0.59
Upf1-202ENSMUST00000215817 Igkv3-2A0A075B5P0 119 aa11.38□□□□□ -0.59
Upf1-202ENSMUST00000215817 Igkv4-59A0A0B4J1I8 117 aa11.38□□□□□ -0.59
Upf1-202ENSMUST00000215817 Igkv6-13A0A0G2JGY3 119 aa11.38□□□□□ -0.59
Upf1-202ENSMUST00000215817 Fn1P11276 2477 aaKnown RBP11.38□□□□□ -0.59
Upf1-202ENSMUST00000215817 Trank1Q8BV79 2999 aa11.37□□□□□ -0.59
Upf1-202ENSMUST00000215817 Brk1Q91VR8 75 aa11.37□□□□□ -0.59
Upf1-202ENSMUST00000215817 OdaphJ3QNT8 126 aa11.36□□□□□ -0.59
Upf1-202ENSMUST00000215817 Socs3O35718 225 aa11.36□□□□□ -0.59
Upf1-202ENSMUST00000215817 LhbO09108 141 aa11.36□□□□□ -0.59
Upf1-202ENSMUST00000215817 Klf13Q9JJZ6 289 aa11.36□□□□□ -0.59
Upf1-202ENSMUST00000215817 Klk11Q9QYN3 276 aa11.36□□□□□ -0.59
Upf1-202ENSMUST00000215817 Gm10300Q8C8P7 189 aa11.35□□□□□ -0.59
Upf1-202ENSMUST00000215817 Ighv13-2A0A0A6YWN3 119 aa11.35□□□□□ -0.59
Upf1-202ENSMUST00000215817 Rbm3O89086 153 aaKnown RBP11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 A830031A19RikQ8BNT5 113 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 Trav4n-4A0A075B615 110 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 Krtap24-1G3X9A2 248 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 GhrhP16043 103 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 Gm4707V9GXN5 68 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 1500011B03RikQ3TTH7 73 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 Gm14137Q8CE97 175 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 Igkv4-74A0A0B4J1I3 119 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 Igkv3-9A0A140T8P4 119 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 MplkipQ9D011 178 aa11.34□□□□□ -0.59
Upf1-202ENSMUST00000215817 9530053A07RikE9PVG8 2581 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 MalO09198 153 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 P01756 117 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 P01757 117 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 Smim26Q3V460 107 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 Trav7-6A0A075B640 112 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 Igkv4-53A0A0G2JFC6 119 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 Gm3618D3Z4P5 127 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 Gm2916Q9D9B9 127 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 Edn1P22387 202 aa11.33□□□□□ -0.6
Upf1-202ENSMUST00000215817 SvipQ3UZP4 77 aa11.32□□□□□ -0.6
Upf1-202ENSMUST00000215817 Chchd5Q9CQP3 110 aa11.32□□□□□ -0.6
Upf1-202ENSMUST00000215817 Gm16381A0A1Y7VKT9 73 aa11.32□□□□□ -0.6
Upf1-202ENSMUST00000215817 Ighv1-5A0A0A6YWG2 117 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 88.2 ms