RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Gm21748Q3UE70 102 aa16.1■□□□□ 0.17
Sox1-201ENSMUST00000180353 1110002E22RikE0CYV9 1786 aa16.1■□□□□ 0.17
Sox1-201ENSMUST00000180353 Trav9n-2A0A0G2JDP3 113 aa16.1■□□□□ 0.17
Sox1-201ENSMUST00000180353 P01820 115 aa16.09■□□□□ 0.17
Sox1-201ENSMUST00000180353 Igkv4-79A0A075B5L8 119 aa16.09■□□□□ 0.17
Sox1-201ENSMUST00000180353 Klk12B2RVZ0 247 aa16.09■□□□□ 0.17
Sox1-201ENSMUST00000180353 Crip2Q9DCT8 208 aaKnown RBP16.09■□□□□ 0.17
Sox1-201ENSMUST00000180353 Ighv5-8A0A075B676 92 aa16.08■□□□□ 0.17
Sox1-201ENSMUST00000180353 Polr2kQ63871 58 aa16.08■□□□□ 0.16
Sox1-201ENSMUST00000180353 Gm9747Q810H1 104 aa16.08■□□□□ 0.16
Sox1-201ENSMUST00000180353 Trav13-1A0A075B644 110 aa16.08■□□□□ 0.16
Sox1-201ENSMUST00000180353 Rpl35aO55142 110 aa16.07■□□□□ 0.16
Sox1-201ENSMUST00000180353 BlcapP62951 87 aa16.07■□□□□ 0.16
Sox1-201ENSMUST00000180353 Wfdc11A2A5H7 82 aa16.07■□□□□ 0.16
Sox1-201ENSMUST00000180353 Map6d1Q14BB9 191 aa16.07■□□□□ 0.16
Sox1-201ENSMUST00000180353 Tns1E9Q0S6 1888 aaKnown RBP16.06■□□□□ 0.16
Sox1-201ENSMUST00000180353 Rps28P62858 69 aaKnown RBP16.06■□□□□ 0.16
Sox1-201ENSMUST00000180353 Fhl1P97447 280 aaKnown RBP16.06■□□□□ 0.16
Sox1-201ENSMUST00000180353 Igkv3-9A0A140T8P4 119 aa16.05■□□□□ 0.16
Sox1-201ENSMUST00000180353 Ep400Q8CHI8 3072 aaKnown RBP16.05■□□□□ 0.16
Sox1-201ENSMUST00000180353 NpwA0A1L1STR8 176 aa16.05■□□□□ 0.16
Sox1-201ENSMUST00000180353 Spink4O35679 86 aa16.05■□□□□ 0.16
Sox1-201ENSMUST00000180353 Flg2Q2VIS4 2362 aa16.04■□□□□ 0.16
Sox1-201ENSMUST00000180353 TectaO08523 2155 aa16.04■□□□□ 0.16
Sox1-201ENSMUST00000180353 Trav9-2A0A075B647 113 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Trav9-4A0A0B4J1K2 113 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 4930535I16RikQ9CUI2 172 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Igkv3-1A0A075B5P1 119 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Trav9d-3A0A075B695 113 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 B230359F08RikA0A0B4J1K3 109 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Rtl10D3YWW5 146 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Rnf152Q8BG47 203 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Arhgap32Q811P8 2089 aa16.03■□□□□ 0.16
Sox1-201ENSMUST00000180353 Cmc4Q61908 68 aa16.02■□□□□ 0.16
Sox1-201ENSMUST00000180353 Trav13-4-dv7A0A075B6C2 110 aa16.02■□□□□ 0.16
Sox1-201ENSMUST00000180353 Eif4ebp1Q60876 117 aa16.02■□□□□ 0.16
Sox1-201ENSMUST00000180353 Trav14-1A0A0G2JF94 121 aa16.01■□□□□ 0.15
Sox1-201ENSMUST00000180353 Arhgef17Q80U35 2057 aa16.01■□□□□ 0.15
Sox1-201ENSMUST00000180353 Trav13d-4A0A0G2JFX3 110 aa16.01■□□□□ 0.15
Sox1-201ENSMUST00000180353 Gm10553J3QPF1 123 aa16.01■□□□□ 0.15
Sox1-201ENSMUST00000180353 9130230L23RikQ8CC80 163 aa16.01■□□□□ 0.15
Sox1-201ENSMUST00000180353 Tmem223Q9CQE2 199 aaKnown RBP16■□□□□ 0.15
Sox1-201ENSMUST00000180353 Trav13-2A0A075B649 110 aa16■□□□□ 0.15
Sox1-201ENSMUST00000180353 Ube2d4D3YUH6 135 aa16■□□□□ 0.15
Sox1-201ENSMUST00000180353 Zfand3Q497H0 227 aa16■□□□□ 0.15
Sox1-201ENSMUST00000180353 Gm10518F6UQQ9 182 aa16■□□□□ 0.15
Sox1-201ENSMUST00000180353 Q99M08 65 aa15.99■□□□□ 0.15
Sox1-201ENSMUST00000180353 Ighv1-5A0A0A6YWG2 117 aa15.99■□□□□ 0.15
Sox1-201ENSMUST00000180353 Q9CX25 107 aa15.99■□□□□ 0.15
Sox1-201ENSMUST00000180353 Gm7257D3YX25 99 aa15.98■□□□□ 0.15
Sox1-201ENSMUST00000180353 SbsponQ3UPR9 264 aa15.98■□□□□ 0.15
Sox1-201ENSMUST00000180353 Gm10735Q3US96 136 aa15.97■□□□□ 0.15
Sox1-201ENSMUST00000180353 TeppQ6IMH0 216 aa15.97■□□□□ 0.15
Sox1-201ENSMUST00000180353 CdsnQ7TPC1 561 aa15.97■□□□□ 0.15
Sox1-201ENSMUST00000180353 Ighv1-66A0A075B5X5 117 aa15.97■□□□□ 0.15
Sox1-201ENSMUST00000180353 Wnk1P83741 2377 aa15.97■□□□□ 0.15
Sox1-201ENSMUST00000180353 Pglyrp1O88593 182 aa15.97■□□□□ 0.15
Sox1-201ENSMUST00000180353 Ighv13-2A0A0A6YWN3 119 aa15.96■□□□□ 0.15
Sox1-201ENSMUST00000180353 Igkv1-122A0A140T8M9 119 aa15.96■□□□□ 0.15
Sox1-201ENSMUST00000180353 P01823 113 aa15.96■□□□□ 0.15
Sox1-201ENSMUST00000180353 Gm10577Q3UDV9 132 aa15.96■□□□□ 0.15
Sox1-201ENSMUST00000180353 Defb45Q3V490 66 aa15.96■□□□□ 0.15
Sox1-201ENSMUST00000180353 Nop10Q9CQS2 64 aa15.96■□□□□ 0.15
Sox1-201ENSMUST00000180353 Piezo1E2JF22 2547 aa15.95■□□□□ 0.14
Sox1-201ENSMUST00000180353 H2al1aQ5M8Q2 105 aa15.95■□□□□ 0.14
Sox1-201ENSMUST00000180353 Zfyve26Q5DU37 2529 aa15.95■□□□□ 0.14
Sox1-201ENSMUST00000180353 Ighv1-58A0A075B5W9 117 aa15.94■□□□□ 0.14
Sox1-201ENSMUST00000180353 Klk9Q32M27 251 aa15.94■□□□□ 0.14
Sox1-201ENSMUST00000180353 Ighv3-3A0A0A6YWL2 116 aa15.94■□□□□ 0.14
Sox1-201ENSMUST00000180353 Dopey1Q8BL99 2399 aa15.92■□□□□ 0.14
Sox1-201ENSMUST00000180353 Ighv1-62-1A0A075B5U3 116 aa15.91■□□□□ 0.14
Sox1-201ENSMUST00000180353 Sorl1O88307 2215 aaKnown RBP15.91■□□□□ 0.14
Sox1-201ENSMUST00000180353 1810032O08RikE9PZV8 113 aa15.91■□□□□ 0.14
Sox1-201ENSMUST00000180353 9430015G10RikA2ASP7 199 aa15.91■□□□□ 0.14
Sox1-201ENSMUST00000180353 Ighv2-7A0A075B5Q8 116 aa15.9■□□□□ 0.14
Sox1-201ENSMUST00000180353 Cox7a1P56392 80 aa15.9■□□□□ 0.14
Sox1-201ENSMUST00000180353 4930524J08RikQ9CUJ5 163 aa15.9■□□□□ 0.14
Sox1-201ENSMUST00000180353 SnurfQ9WU12 71 aa15.9■□□□□ 0.14
Sox1-201ENSMUST00000180353 Sec61gP60060 68 aa15.9■□□□□ 0.14
Sox1-201ENSMUST00000180353 Tcte2E9PY37 120 aa15.89■□□□□ 0.13
Sox1-201ENSMUST00000180353 Prr15lQ8JZM2 100 aa15.89■□□□□ 0.13
Sox1-201ENSMUST00000180353 Igkv8-26A0A075B5N5 123 aa15.89■□□□□ 0.13
Sox1-201ENSMUST00000180353 Leap2Q91V13 76 aa15.88■□□□□ 0.13
Sox1-201ENSMUST00000180353 Edn3P48299 214 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 P84751 237 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 Fgfbp3Q1HCM0 245 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 4930518I15RikQ3V2W7 57 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 Gm10322F7D7I4 111 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 P01643 108 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 SptssbQ925E8 76 aa15.87■□□□□ 0.13
Sox1-201ENSMUST00000180353 Defb26Q30KN7 186 aa15.86■□□□□ 0.13
Sox1-201ENSMUST00000180353 Crlf1Q9JM58 425 aa15.86■□□□□ 0.13
Sox1-201ENSMUST00000180353 Mapk1ip1lQ8BH93 242 aa15.85■□□□□ 0.13
Sox1-201ENSMUST00000180353 Tcl1b3P56842 122 aa15.85■□□□□ 0.13
Sox1-201ENSMUST00000180353 Brwd1Q921C3 2304 aa15.85■□□□□ 0.13
Sox1-201ENSMUST00000180353 Tln1P26039 2541 aaKnown RBP15.85■□□□□ 0.13
Sox1-201ENSMUST00000180353 DscamQ9ERC8 2013 aa15.84■□□□□ 0.13
Sox1-201ENSMUST00000180353 1700011M02RikB1AX35 88 aa15.84■□□□□ 0.13
Sox1-201ENSMUST00000180353 P06320 134 aa15.84■□□□□ 0.13
Sox1-201ENSMUST00000180353 UqcrqQ9CQ69 82 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 84.7 ms