RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm29423A0A087WRM1 55 aa10.86□□□□□ -0.67
Nup54-201ENSMUST00000038514 Reg3gO09049 174 aa10.86□□□□□ -0.67
Nup54-201ENSMUST00000038514 Tmem213Q08EA8 116 aa10.86□□□□□ -0.67
Nup54-201ENSMUST00000038514 LrbaQ9ESE1 2856 aa10.86□□□□□ -0.67
Nup54-201ENSMUST00000038514 Trav13d-1A0A075B606 110 aa10.85□□□□□ -0.67
Nup54-201ENSMUST00000038514 Igkv4-78A0A0A6YYE5 119 aa10.85□□□□□ -0.67
Nup54-201ENSMUST00000038514 4930415O20RikQ8CDT5 131 aa10.85□□□□□ -0.67
Nup54-201ENSMUST00000038514 Ube2wQ8VDW4 151 aa10.85□□□□□ -0.67
Nup54-201ENSMUST00000038514 Glrp1E9Q9S8 174 aa10.85□□□□□ -0.67
Nup54-201ENSMUST00000038514 Igkv4-91A0A075B5L2 119 aa10.84□□□□□ -0.67
Nup54-201ENSMUST00000038514 Dmbt1Q60997 2085 aa10.84□□□□□ -0.67
Nup54-201ENSMUST00000038514 Abca2P41234 2434 aa10.83□□□□□ -0.68
Nup54-201ENSMUST00000038514 H1fxQ80ZM5 188 aa10.83□□□□□ -0.68
Nup54-201ENSMUST00000038514 4930470P17RikQ9D542 155 aa10.83□□□□□ -0.68
Nup54-201ENSMUST00000038514 OtoglF7A4A7 2325 aa10.83□□□□□ -0.68
Nup54-201ENSMUST00000038514 Trbv30A0A0B4J1P1 111 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 Klk1b4P00757 256 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 Fam110dQ80X91 271 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 Trav7-6A0A075B640 112 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 4930432M17RikQ3V0W9 174 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 Srsf12Q8C8K3 266 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 Prelid3aQ8VE85 172 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 Tmem101Q91VP7 257 aa10.82□□□□□ -0.68
Nup54-201ENSMUST00000038514 P01786 117 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Eif4ebp3Q80VV3 101 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Trav9n-2A0A0G2JDP3 113 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Gm815Q3UWS2 115 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Eif4ebp1Q60876 117 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Rnf152Q8BG47 203 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Wdr38Q9D994 303 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Muc4Q8JZM8 3443 aa10.81□□□□□ -0.68
Nup54-201ENSMUST00000038514 Gm17472A0A075B683 117 aa10.8□□□□□ -0.68
Nup54-201ENSMUST00000038514 Ang3P97802 145 aa10.8□□□□□ -0.68
Nup54-201ENSMUST00000038514 Ucn2Q99ML8 113 aa10.79□□□□□ -0.68
Nup54-201ENSMUST00000038514 P01738 130 aa10.79□□□□□ -0.68
Nup54-201ENSMUST00000038514 Gm10767Q3TQP0 103 aa10.79□□□□□ -0.68
Nup54-201ENSMUST00000038514 Lyrm7Q9DA03 104 aa10.79□□□□□ -0.68
Nup54-201ENSMUST00000038514 Morn3Q8C5T4 241 aa10.78□□□□□ -0.68
Nup54-201ENSMUST00000038514 Gm11020F6ZGD5 61 aa10.77□□□□□ -0.68
Nup54-201ENSMUST00000038514 Gm10251J3QPM5 127 aa10.77□□□□□ -0.68
Nup54-201ENSMUST00000038514 Defb18Q30KP5 85 aa10.77□□□□□ -0.68
Nup54-201ENSMUST00000038514 Gm4861Q8C5A4 106 aa10.77□□□□□ -0.68
Nup54-201ENSMUST00000038514 Ighv1-61P01749 117 aa10.77□□□□□ -0.69
Nup54-201ENSMUST00000038514 P01823 113 aa10.77□□□□□ -0.69
Nup54-201ENSMUST00000038514 Cox6cQ9CPQ1 76 aa10.77□□□□□ -0.69
Nup54-201ENSMUST00000038514 1700010B08RikQ9DAI7 102 aa10.77□□□□□ -0.69
Nup54-201ENSMUST00000038514 LystP97412 3788 aa10.76□□□□□ -0.69
Nup54-201ENSMUST00000038514 Gm3443F7CCV5 94 aa10.76□□□□□ -0.69
Nup54-201ENSMUST00000038514 Gm10542F6XDR3 90 aa10.76□□□□□ -0.69
Nup54-201ENSMUST00000038514 Akap6E9Q9K8 2307 aa10.75□□□□□ -0.69
Nup54-201ENSMUST00000038514 Atp5eP56382 52 aa10.75□□□□□ -0.69
Nup54-201ENSMUST00000038514 Q99M08 65 aa10.75□□□□□ -0.69
Nup54-201ENSMUST00000038514 Nhlrc1Q8BR37 401 aa10.74□□□□□ -0.69
Nup54-201ENSMUST00000038514 Rnf183Q8QZS5 190 aa10.74□□□□□ -0.69
Nup54-201ENSMUST00000038514 Sostdc1Q9CQN4 206 aa10.74□□□□□ -0.69
Nup54-201ENSMUST00000038514 Gm8439G3UWA7 96 aa10.74□□□□□ -0.69
Nup54-201ENSMUST00000038514 Ly6hQ9WUC3 139 aa10.74□□□□□ -0.69
Nup54-201ENSMUST00000038514 OtogO55225 2910 aa10.74□□□□□ -0.69
Nup54-201ENSMUST00000038514 Igkv4-79A0A075B5L8 119 aa10.73□□□□□ -0.69
Nup54-201ENSMUST00000038514 Gm9513B3GLJ6 99 aa10.73□□□□□ -0.69
Nup54-201ENSMUST00000038514 CirbpP60824 172 aaKnown RBP10.73□□□□□ -0.69
Nup54-201ENSMUST00000038514 Shisa2Q8QZV2 295 aa10.73□□□□□ -0.69
Nup54-201ENSMUST00000038514 Itpr1P11881 2749 aa10.73□□□□□ -0.69
Nup54-201ENSMUST00000038514 SpinklQ8CEK3 90 aa10.73□□□□□ -0.69
Nup54-201ENSMUST00000038514 Smim10l1A0A087WNQ7 89 aa10.72□□□□□ -0.69
Nup54-201ENSMUST00000038514 Trav13n-1A0A0G2JEU8 110 aa10.72□□□□□ -0.69
Nup54-201ENSMUST00000038514 Fxyd5P97808 178 aa10.72□□□□□ -0.69
Nup54-201ENSMUST00000038514 Ighv1-62-1A0A075B5U3 116 aa10.71□□□□□ -0.69
Nup54-201ENSMUST00000038514 Gm9913Q8BQQ2 135 aa10.71□□□□□ -0.69
Nup54-201ENSMUST00000038514 Phpt1Q9DAK9 124 aa10.71□□□□□ -0.69
Nup54-201ENSMUST00000038514 Gm26661M0QWV4 156 aa10.7□□□□□ -0.7
Nup54-201ENSMUST00000038514 Tfpi2O35536 230 aa10.7□□□□□ -0.7
Nup54-201ENSMUST00000038514 P01729 129 aa10.7□□□□□ -0.7
Nup54-201ENSMUST00000038514 Arid1bE9Q4N7 2244 aa10.69□□□□□ -0.7
Nup54-201ENSMUST00000038514 Gm7849D3YX03 116 aa10.69□□□□□ -0.7
Nup54-201ENSMUST00000038514 Foxc1Q61572 553 aa10.69□□□□□ -0.7
Nup54-201ENSMUST00000038514 Avpi1Q9D7H4 142 aa10.69□□□□□ -0.7
Nup54-201ENSMUST00000038514 Xlr5cQ9JJR2 179 aa10.68□□□□□ -0.7
Nup54-201ENSMUST00000038514 AcacbE9Q4Z2 2448 aa10.68□□□□□ -0.7
Nup54-201ENSMUST00000038514 Gcn1E9PVA8 2671 aaKnown RBP10.68□□□□□ -0.7
Nup54-201ENSMUST00000038514 Plac8l1Q08EJ0 177 aa10.68□□□□□ -0.7
Nup54-201ENSMUST00000038514 TeppQ6IMH0 216 aa10.68□□□□□ -0.7
Nup54-201ENSMUST00000038514 Utp20Q5XG71 2788 aaKnown RBP10.68□□□□□ -0.7
Nup54-201ENSMUST00000038514 ColqO35348 457 aa10.67□□□□□ -0.7
Nup54-201ENSMUST00000038514 Rpl36aP83882 106 aaKnown RBP10.67□□□□□ -0.7
Nup54-201ENSMUST00000038514 Gm10735Q3US96 136 aa10.67□□□□□ -0.7
Nup54-201ENSMUST00000038514 Spink1P09036 80 aa10.67□□□□□ -0.7
Nup54-201ENSMUST00000038514 Cdc42se2Q8BGH7 84 aa10.67□□□□□ -0.7
Nup54-201ENSMUST00000038514 Lypd5Q9D7Z7 256 aa10.67□□□□□ -0.7
Nup54-201ENSMUST00000038514 1700011M02RikB1AX35 88 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 4930546C10RikE9Q4Y3 121 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 P01745 121 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Spry2Q9QXV8 315 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Rnase1P00683 149 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Cops9Q3U898 57 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Gm10577Q3UDV9 132 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Znf740Q6NZQ6 180 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Defb42Q8BVB5 75 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Znf414Q9DCK4 299 aa10.66□□□□□ -0.7
Nup54-201ENSMUST00000038514 Lst1O08843 95 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms