RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 A830031A19RikQ8BNT5 113 aa17.35■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 9430015G10RikA2ASP7 199 aa17.34■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Gm12689Q8BQU9 117 aa17.34■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Ufsp1Q9CZP0 217 aa17.34■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Dennd4cA6H8H2 1906 aa17.34■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Heatr5aQ5PRF0 2038 aa17.34■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Qrich2A0A140LIY9 2337 aa17.33■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 PkdrejQ9Z0T6 2126 aa17.33■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Ighv3-3A0A0A6YWL2 116 aa17.33■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Gm10577Q3UDV9 132 aa17.33■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Gm10322F7D7I4 111 aa17.32■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Ighv1-66A0A075B5X5 117 aa17.32■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 H2al1bA0A087WP11 105 aa17.31■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 P01729 129 aa17.31■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 1110002E22RikE0CYV9 1786 aa17.31■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Col4a6B1AVK5 1691 aa17.31■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 TshbP12656 138 aa17.3■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 TncQ80YX1 2110 aa17.3■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 A830005F24RikQ8BRT5 167 aa17.29■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Plac8l1Q08EJ0 177 aa17.29■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Higd2aQ9CQJ1 106 aa17.29■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Sptbn1Q62261 2363 aaKnown RBP17.28■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Ighv2-3A0A075B696 115 aa17.28■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Sh2d1aO88890 126 aa17.28■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Gm9805F6YK59 57 aa17.28■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Zfp407G3UVV3 2246 aa17.28■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Igkv3-10A0A0G2JGN0 119 aa17.27■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 P06320 134 aa17.27■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 Eml6Q5SQM0 1958 aa17.27■□□□□ 0.36
Sh3rf1-201ENSMUST00000034060 AcacaQ5SWU9 2345 aa17.26■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Psmb11Q8BG41 302 aa17.26■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Fgf23Q9EPC2 251 aa17.26■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Cox7bP56393 80 aa17.26■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Crybg1A0A0G2JG52 2065 aa17.26■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Nup210Q9QY81 1886 aaKnown RBP17.24■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Med12A2AGH6 2190 aa17.24■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 NpwA0A1L1STR8 176 aa17.24■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Abca1P41233 2261 aa17.24■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Polr2kQ63871 58 aa17.23■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Ndufs5Q99LY9 106 aa17.23■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Igkv4-92A0A0B4J1I2 117 aa17.23■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Gm9913Q8BQQ2 135 aa17.23■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Col8a2P25318 699 aa17.23■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Fam19a1Q7TPG8 133 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Ighv1-63A0A075B5X2 117 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Edn2P22389 175 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Igkv3-4A0A140T8Q4 119 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 B430305J03RikQ8BQQ8 176 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Ighv1-62-1A0A075B5U3 116 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Smrp1Q2MH31 260 aa17.22■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 H2al1aQ5M8Q2 105 aa17.21■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 H2al1eQ810S6 105 aa17.21■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Prr12E9PYL2 2035 aaKnown RBP17.21■□□□□ 0.35
Sh3rf1-201ENSMUST00000034060 Gm12057A0A087WR21 115 aa17.2■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 P01823 113 aa17.2■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Pla2g2aP31482 146 aa17.2■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Cd27P41272 250 aa17.2■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Lmo4P61969 165 aa17.2■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Arfgef3Q3UGY8 2170 aa17.2■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Tcf20Q9EPQ8 1987 aa17.19■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Chchd7Q8K2Q5 85 aa17.19■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 BaalcQ8VHV1 145 aa17.18■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 5730596B20RikQ8BQ08 205 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Serp1Q9Z1W5 66 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Ccdc179J3QM76 67 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Gm10226O88253 85 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Tcl1b5P56845 121 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Ncoa6Q9JL19 2067 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Bdp1Q571C7 2467 aa17.17■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Ube2d1P61080 147 aaKnown RBP17.16■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 Smr3aQ61900 147 aa17.15■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 AtrxQ61687 2476 aaKnown RBP17.15■□□□□ 0.34
Sh3rf1-201ENSMUST00000034060 E130116L18RikQ8BMV6 101 aa17.14■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Q8K1L6 76 aa17.14■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Spry2Q9QXV8 315 aa17.14■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Defb13Q8R2I4 64 aa17.13■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Cep295Q8BQ48 2412 aa17.13■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Trav14-1A0A0G2JF94 121 aa17.13■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 9230102O04RikA2ASX7 82 aa17.13■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Igkv3-3A0A140T8Q0 119 aa17.12■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Ighv8-11A0A075B5X4 119 aa17.12■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Ube2d3P61079 147 aa17.12■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Ube2d2P62838 147 aa17.12■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Gm16223Q8CBM3 117 aa17.1■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 2010109I03RikQ9CQ11 111 aa17.1■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Igkv1-117A0A140T8M0 119 aa17.09■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Igkv8-21A0A140T8P7 120 aa17.09■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Pip4p1Q3TWL2 284 aa17.09■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Esm1Q9QYY7 184 aa17.09■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 Armcx4E9PWM3 2356 aa17.09■□□□□ 0.33
Sh3rf1-201ENSMUST00000034060 4930535I16RikQ9CUI2 172 aa17.08■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Pla2g2eQ9QUL3 142 aa17.08■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Fam208bQ5DTT3 2382 aa17.07■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 1520401A03RikA0A0J9YVH6 598 aa17.07■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 1700011M02RikB1AX35 88 aa17.06■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Ncor2Q9WU42 2472 aaKnown RBP17.05■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Ighv1-59A0A0A6YXE0 117 aa17.05■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 Cep250Q60952 2414 aa17.05■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 A0A286YE49 62 aa17.05■□□□□ 0.32
Sh3rf1-201ENSMUST00000034060 HelzQ6DFV5 1964 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 153.3 ms