RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Brk1Q91VR8 75 aa13.89□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Sprr3O09116 238 aa13.89□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Klk5Q9D140 293 aa13.89□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Ighv8-12A0A0G2JDE1 119 aa13.89□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Gm17472A0A075B683 117 aa13.89□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Pglyrp1O88593 182 aa13.88□□□□□ -0.19
Ebf3-201ENSMUST00000033378 C1qcQ02105 246 aa13.88□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Ighv1-85A0A075B5Y6 117 aa13.87□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Klk12B2RVZ0 247 aa13.87□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Tcte2E9PY37 120 aa13.87□□□□□ -0.19
Ebf3-201ENSMUST00000033378 PrcdQ00LT2 53 aa13.87□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Wdr38Q9D994 303 aa13.87□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Smim1P0C8K7 78 aa13.87□□□□□ -0.19
Ebf3-201ENSMUST00000033378 9430069I07RikQ9CX21 111 aa13.86□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Ighv8-5A0A0A6YY60 119 aa13.86□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Fxyd5P97808 178 aa13.86□□□□□ -0.19
Ebf3-201ENSMUST00000033378 B430305J03RikQ8BQQ8 176 aa13.85□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Rnf114Q9ET26 229 aa13.85□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Ankhd1E9PUR0 2548 aaKnown RBP13.85□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Q9D8Q6 235 aa13.85□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Ighv2-3A0A075B696 115 aa13.84□□□□□ -0.19
Ebf3-201ENSMUST00000033378 C2cd3Q52KB6 2323 aa13.84□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Gm10251J3QPM5 127 aa13.84□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Tmem254aP0DN89 123 aa13.84□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Tmem254bP0DN90 123 aa13.84□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Tmem254cP0DN91 123 aa13.84□□□□□ -0.19
Ebf3-201ENSMUST00000033378 Igkv4-58A0A0G2JGI6 119 aa13.83□□□□□ -0.19
Ebf3-201ENSMUST00000033378 DscamQ9ERC8 2013 aa13.83□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Tmem258P61166 79 aa13.82□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Ucn2Q99ML8 113 aa13.82□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Ebi3O35228 228 aa13.81□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Tm2d2Q8R0I4 213 aa13.81□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Ormdl1Q921I0 153 aa13.81□□□□□ -0.2
Ebf3-201ENSMUST00000033378 BikO70337 150 aa13.81□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Defb18Q30KP5 85 aa13.8□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Gm9913Q8BQQ2 135 aa13.8□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Ly6hQ9WUC3 139 aa13.8□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Sh2d1aO88890 126 aa13.8□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Hivep3A2A884 2348 aa13.8□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Pla2g2aP31482 146 aa13.79□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Cox8cA6H666 72 aa13.79□□□□□ -0.2
Ebf3-201ENSMUST00000033378 NrgnP60761 78 aa13.79□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Polr2kQ63871 58 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Igkv1-88A0A140T8N1 120 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Edn2P22389 175 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Spink8Q09TK9 105 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Klk11Q9QYN3 276 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 CnfnQ6PCW6 111 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Gm4861Q8C5A4 106 aa13.78□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Zc2hc1bQ9D534 172 aa13.77□□□□□ -0.2
Ebf3-201ENSMUST00000033378 Ighv1-66A0A075B5X5 117 aa13.77□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Ttc28Q80XJ3 2450 aa13.77□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Ovol3D3YYM0 189 aa13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 LhbO09108 141 aa13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Gm2916Q9D9B9 127 aa13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Usp9xP70398 2559 aaKnown RBP13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Myo9aQ8C170 2542 aa13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Ighv2-6-8A0A0A6YWY9 116 aa13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Rpl39lQ9CQD0 51 aa13.76□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Eif4ebp1Q60876 117 aa13.75□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Dkk4Q8VEJ3 221 aa13.75□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Tmem223Q9CQE2 199 aaKnown RBP13.75□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Nav3Q80TN7 2359 aa13.75□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Ighv3-3A0A0A6YWL2 116 aa13.75□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Fam222aQ6PGH4 453 aa13.75□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Rnase1P00683 149 aa13.74□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Ighv1-61P01749 117 aa13.74□□□□□ -0.21
Ebf3-201ENSMUST00000033378 SrarpQ3ULG3 163 aa13.74□□□□□ -0.21
Ebf3-201ENSMUST00000033378 CrygdP04342 174 aa13.74□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Timm17bQ9Z0V7 172 aa13.74□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Naa38Q9D2U5 125 aa13.73□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Gphb5Q812B2 130 aa13.73□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Spata25Q9DA57 226 aa13.73□□□□□ -0.21
Ebf3-201ENSMUST00000033378 1520401A03RikA0A0J9YVH6 598 aa13.72□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Cd27P41272 250 aa13.72□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Rtl10D3YWW5 146 aa13.72□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Ighv1-72P01751 139 aa13.71□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Fgfbp3Q1HCM0 245 aa13.71□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Defb12Q8K4N3 78 aa13.71□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Chd8Q09XV5 2582 aaKnown RBP13.71□□□□□ -0.21
Ebf3-201ENSMUST00000033378 P01823 113 aa13.71□□□□□ -0.21
Ebf3-201ENSMUST00000033378 Gm21748Q3UE70 102 aa13.71□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Camk2n2Q78WH7 79 aa13.7□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Ube2bP63147 152 aa13.7□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Gm26566Q8CAC1 153 aa13.7□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Pip4p1Q3TWL2 284 aa13.7□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Ppp1r32Q148A4 427 aa13.69□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Lce6aD3YV94 81 aa13.69□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Gm10226O88253 85 aa13.68□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Hivep2Q3UHF7 2430 aa13.68□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Trav9n-4A0A075B631 113 aa13.68□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Ighv1-62-1A0A075B5U3 116 aa13.68□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Rpl18aP62717 176 aaKnown RBP13.68□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Cox7b2Q9D2H1 82 aa13.67□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Mrpl52Q9D0Y8 121 aa13.67□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Ube2d1P61080 147 aaKnown RBP13.67□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Spry2Q9QXV8 315 aa13.67□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Tns1E9Q0S6 1888 aaKnown RBP13.67□□□□□ -0.22
Ebf3-201ENSMUST00000033378 P01729 129 aa13.66□□□□□ -0.22
Ebf3-201ENSMUST00000033378 Lrp4Q8VI56 1905 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms