RNA–Protein interactions for RNA: ENSMUST00000021056.7

Scn4a-201, Transcript of Sodium channel protein type 4 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn4a, Length 6,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4a-201ENSMUST00000021056 Gm9925F6T2U3 160 aa7.16□□□□□ -1.26
Scn4a-201ENSMUST00000021056 Q8K1L6 76 aa7.16□□□□□ -1.26
Scn4a-201ENSMUST00000021056 Gm10762Q9CZN6 115 aa7.16□□□□□ -1.26
Scn4a-201ENSMUST00000021056 P01747 120 aa7.15□□□□□ -1.26
Scn4a-201ENSMUST00000021056 C130032M10RikQ8C888 123 aa7.15□□□□□ -1.26
Scn4a-201ENSMUST00000021056 Gm14137Q8CE97 175 aa7.15□□□□□ -1.26
Scn4a-201ENSMUST00000021056 Shank1D3YZU1 2167 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Defb45Q3V490 66 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Med12lQ8BQM9 2157 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Gtf3c1Q8K284 2101 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 P0C913 63 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Gm6899Q3USS0 134 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Rai1Q61818 1889 aa7.15□□□□□ -1.27
Scn4a-201ENSMUST00000021056 A230072I06RikQ3UUJ8 172 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 SycnQ8VCK7 134 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Q08AU9 97 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Alpk2Q91ZB0 2144 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Zfp407G3UVV3 2246 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Gm45861A0A1B0GRY3 1923 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Fam208bQ5DTT3 2382 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 AcacaQ5SWU9 2345 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ighv1-85A0A075B5Y6 117 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Gm19935A0A1B0GSF9 52 aa7.14□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Defb2P82020 71 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Map6d1Q14BB9 191 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 1600014C23RikQ9DAX4 101 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Col5a3Q9JLI2 1739 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 A0A286YCN5 57 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Myo9bQ9QY06 2114 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ighv2-9-1A0A075B697 116 aa7.13□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Odf3l1Q810P2 275 aa7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Dock7Q8R1A4 2130 aaKnown RBP7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ly6gP35461 111 aa7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 P01823 113 aa7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Exph5Q0VAV2 1960 aa7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ighv1-5A0A0A6YWG2 117 aa7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 PoleQ9WVF7 2283 aa7.12□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Gm21748Q3UE70 102 aa7.11□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ighv2-9A0A075B5Q5 116 aa7.11□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Wfdc12Q9JHY3 85 aa7.11□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Trbv13-2A0A140T8N6 113 aa7.11□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Prol1E9PYQ4 312 aa7.11□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Gm10570F6VB42 170 aa7.11□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ckap5A2AGT5 2032 aaKnown RBP7.1□□□□□ -1.27
Scn4a-201ENSMUST00000021056 A730009L09RikA0A1B0GS82 72 aa7.1□□□□□ -1.27
Scn4a-201ENSMUST00000021056 SprnQ8BWU1 147 aa7.1□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Eif4ebp1Q60876 117 aa7.1□□□□□ -1.27
Scn4a-201ENSMUST00000021056 AplnQ9R0R4 77 aa7.1□□□□□ -1.27
Scn4a-201ENSMUST00000021056 P06328 117 aa7.1□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Ighv1-72P01751 139 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 P01728 117 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 P18527 97 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 ThadaA8C756 1938 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 9130230L23RikQ8CC80 163 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 PpdpfQ9CR37 115 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Snai3Q9QY31 287 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Prr14lE9Q7C4 1971 aa7.09□□□□□ -1.27
Scn4a-201ENSMUST00000021056 Kif26bQ7TNC6 2112 aa7.09□□□□□ -1.28
Scn4a-201ENSMUST00000021056 P01755 137 aa7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Crybg1A0A0G2JG52 2065 aa7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Defb11Q8R2I7 77 aa7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Cep250Q60952 2414 aa7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Sptbn1Q62261 2363 aaKnown RBP7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 9230109A22RikQ8BHE6 111 aa7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Tln2Q71LX4 2375 aa7.08□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Cacna1hO88427 2365 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Ncor2Q9WU42 2472 aaKnown RBP7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 AvpP35455 168 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Cox8cA6H666 72 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Rp1P56716 2095 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Rpl28P41105 137 aaKnown RBP7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Gm9949Q8C9F4 104 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Q9D131 166 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Foxs1Q61574 329 aa7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 TprF6ZDS4 2431 aaKnown RBP7.07□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Adm2Q7TNK8 150 aa7.06□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Ighv1-61P01749 117 aa7.06□□□□□ -1.28
Scn4a-201ENSMUST00000021056 SnurfQ9WU12 71 aa7.06□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Dock9Q8BIK4 2055 aa7.06□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Ighv2-6-8A0A0A6YWY9 116 aa7.06□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Fhl2O70433 279 aa7.06□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Ifitm6A0A1B0GS75 124 aa7.05□□□□□ -1.28
Scn4a-201ENSMUST00000021056 BC025920Q3US60 128 aa7.05□□□□□ -1.28
Scn4a-201ENSMUST00000021056 P06329 120 aa7.05□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Sostdc1Q9CQN4 206 aa7.05□□□□□ -1.28
Scn4a-201ENSMUST00000021056 4930519P11RikQ9CUJ8 166 aa7.05□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Myo7bQ99MZ6 2113 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 P01820 115 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Cd27P41272 250 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Sprr3O09116 238 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Odf3Q920N1 254 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 RetnlbQ99P86 105 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 P01630 113 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Nlrc5C3VPR6 1915 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Plxnb1Q8CJH3 2119 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Asxl3Q8C4A5 2259 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Defb39Q70KL3 74 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Armcx4E9PWM3 2356 aa7.04□□□□□ -1.28
Scn4a-201ENSMUST00000021056 FcorP0DJI6 106 aa7.03□□□□□ -1.28
Scn4a-201ENSMUST00000021056 Tmem131O70472 1877 aa7.03□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms