RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Fam19a1Q7TPG8 133 aa11.63□□□□□ -0.55
Chd3-201ENSMUST00000092971 NpyP57774 97 aa11.63□□□□□ -0.55
Chd3-201ENSMUST00000092971 Wfdc10Q3V2J9 124 aa11.63□□□□□ -0.55
Chd3-201ENSMUST00000092971 Wisp3D3Z5L9 354 aa11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 Ormdl1Q921I0 153 aa11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 H2al1mQ9DAD9 105 aa11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 LctF8VPT3 1931 aa11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 Trav4d-3A0A075B625 110 aa11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 Trip12G5E870 2025 aaKnown RBP11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 C2cd3Q52KB6 2323 aa11.62□□□□□ -0.55
Chd3-201ENSMUST00000092971 ThadaA8C756 1938 aa11.61□□□□□ -0.55
Chd3-201ENSMUST00000092971 Igkv3-12A0A140T8P0 119 aa11.61□□□□□ -0.55
Chd3-201ENSMUST00000092971 P01658 132 aa11.61□□□□□ -0.55
Chd3-201ENSMUST00000092971 Gm44965A0A0N4SVR3 59 aa11.61□□□□□ -0.55
Chd3-201ENSMUST00000092971 Tfpi2O35536 230 aa11.61□□□□□ -0.55
Chd3-201ENSMUST00000092971 9230109A22RikQ8BHE6 111 aa11.61□□□□□ -0.55
Chd3-201ENSMUST00000092971 Pla2g2aP31482 146 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 7420426K07RikQ3UX66 186 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 DysfQ9ESD7 2090 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Igkv8-21A0A140T8P7 120 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Arid2E9Q7E2 1828 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Klk9Q32M27 251 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Ntf4Q80VU4 209 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Ighv12-3A0A075B5T1 117 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Ighv1-53A0A075B5W3 117 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 P01748 117 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Crip1P63254 77 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 4930470P17RikQ9D542 155 aa11.6□□□□□ -0.55
Chd3-201ENSMUST00000092971 Ufsp1Q9CZP0 217 aa11.59□□□□□ -0.55
Chd3-201ENSMUST00000092971 Dazap2Q9DCP9 168 aa11.59□□□□□ -0.55
Chd3-201ENSMUST00000092971 MyofQ69ZN7 2048 aaKnown RBP11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 Dopey1Q8BL99 2399 aa11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 P01747 120 aa11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 BC107364E9Q5A2 140 aa11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 Fancd2osQ9D4K4 178 aa11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 A130051J06RikQ8CAU1 227 aa11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 Brwd1Q921C3 2304 aa11.58□□□□□ -0.56
Chd3-201ENSMUST00000092971 Gm10401E9Q3K6 71 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Defb40Q70KL2 73 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Tmem254aP0DN89 123 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Tmem254bP0DN90 123 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Tmem254cP0DN91 123 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 PtprfA2A8L5 1898 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Scn10aQ6QIY3 1958 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Cox7bP56393 80 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Q9DAQ5 155 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 EnhoQ8K1D8 76 aa11.57□□□□□ -0.56
Chd3-201ENSMUST00000092971 Rnf138Q9CQE0 245 aaKnown RBP11.56□□□□□ -0.56
Chd3-201ENSMUST00000092971 Cryba4Q9JJV0 196 aa11.56□□□□□ -0.56
Chd3-201ENSMUST00000092971 P06320 134 aa11.56□□□□□ -0.56
Chd3-201ENSMUST00000092971 Alms1Q8K4E0 3251 aa11.56□□□□□ -0.56
Chd3-201ENSMUST00000092971 Ighv10-3A0A075B5T6 119 aa11.56□□□□□ -0.56
Chd3-201ENSMUST00000092971 Tnrc6aQ3UHK8 1896 aaKnown RBP11.56□□□□□ -0.56
Chd3-201ENSMUST00000092971 Sbf1Q6ZPE2 1867 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 AW146154Q3TPQ7 468 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 Fam110aQ8R184 296 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 Prr14lE9Q7C4 1971 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 NpwA0A1L1STR8 176 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 Gm15557A6PWY0 234 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 Gm12689Q8BQU9 117 aa11.55□□□□□ -0.56
Chd3-201ENSMUST00000092971 P04940 107 aa11.54□□□□□ -0.56
Chd3-201ENSMUST00000092971 P04941 107 aa11.54□□□□□ -0.56
Chd3-201ENSMUST00000092971 Tax1bp3Q9DBG9 124 aa11.54□□□□□ -0.56
Chd3-201ENSMUST00000092971 Q9D131 166 aa11.54□□□□□ -0.56
Chd3-201ENSMUST00000092971 Triap1Q9D8Z2 76 aa11.54□□□□□ -0.56
Chd3-201ENSMUST00000092971 Rnf152Q8BG47 203 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 Trav14-1A0A0G2JF94 121 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 Gm12353A2AGJ4 60 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 Nckap5E9QAE1 1909 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 Ighv10-1A0A0B4J1J6 119 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 1700010B08RikQ9DAI7 102 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 Ighv8-5A0A0A6YY60 119 aa11.53□□□□□ -0.56
Chd3-201ENSMUST00000092971 Wfdc3Q14AE4 130 aa11.52□□□□□ -0.57
Chd3-201ENSMUST00000092971 A0A286YCN5 57 aa11.52□□□□□ -0.57
Chd3-201ENSMUST00000092971 Tmem223Q9CQE2 199 aaKnown RBP11.52□□□□□ -0.57
Chd3-201ENSMUST00000092971 Trav4-3A0A0B4J1K1 110 aa11.52□□□□□ -0.57
Chd3-201ENSMUST00000092971 Defb38Q7TNV7 63 aa11.51□□□□□ -0.57
Chd3-201ENSMUST00000092971 Gm20708H3BKF4 155 aa11.51□□□□□ -0.57
Chd3-201ENSMUST00000092971 Defb18Q30KP5 85 aa11.51□□□□□ -0.57
Chd3-201ENSMUST00000092971 Fam19a5Q91WE9 132 aa11.51□□□□□ -0.57
Chd3-201ENSMUST00000092971 P06328 117 aa11.5□□□□□ -0.57
Chd3-201ENSMUST00000092971 IgipA0A1B0GR74 53 aa11.5□□□□□ -0.57
Chd3-201ENSMUST00000092971 Tcl1b3P56842 122 aa11.5□□□□□ -0.57
Chd3-201ENSMUST00000092971 Tcf20Q9EPQ8 1987 aa11.5□□□□□ -0.57
Chd3-201ENSMUST00000092971 Tcl1b5P56845 121 aa11.49□□□□□ -0.57
Chd3-201ENSMUST00000092971 P04942 107 aa11.49□□□□□ -0.57
Chd3-201ENSMUST00000092971 Itgb4A2A863 1818 aa11.49□□□□□ -0.57
Chd3-201ENSMUST00000092971 Rnase1P00683 149 aa11.49□□□□□ -0.57
Chd3-201ENSMUST00000092971 P84750 121 aa11.49□□□□□ -0.57
Chd3-201ENSMUST00000092971 Vpreb1P13372 142 aa11.48□□□□□ -0.57
Chd3-201ENSMUST00000092971 Arhgef17Q80U35 2057 aa11.48□□□□□ -0.57
Chd3-201ENSMUST00000092971 Gm19684G3UZ45 117 aa11.48□□□□□ -0.57
Chd3-201ENSMUST00000092971 Obox8V9GWY9 217 aa11.47□□□□□ -0.57
Chd3-201ENSMUST00000092971 Thsd7bQ6P4U0 1607 aa11.47□□□□□ -0.57
Chd3-201ENSMUST00000092971 Gm6034E9Q101 117 aa11.47□□□□□ -0.57
Chd3-201ENSMUST00000092971 Ighv1-11A0A0A6YWI9 117 aa11.47□□□□□ -0.57
Chd3-201ENSMUST00000092971 StrcQ8VIM6 1809 aa11.47□□□□□ -0.57
Chd3-201ENSMUST00000092971 Ly6hQ9WUC3 139 aa11.47□□□□□ -0.57
Chd3-201ENSMUST00000092971 Atp5eP56382 52 aa11.46□□□□□ -0.57
Chd3-201ENSMUST00000092971 Trbv16A0A0B4J1H3 115 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 144 ms