RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Ighv3-3A0A0A6YWL2 116 aa13.21□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Gphb5Q812B2 130 aa13.21□□□□□ -0.29
Ptpra-201ENSMUST00000028769 Atp6v0bQ91V37 205 aa13.21□□□□□ -0.29
Ptpra-201ENSMUST00000028769 NipblQ6KCD5 2798 aaKnown RBP13.21□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ighv1-75A0A075B5Y2 117 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ighv2-3A0A075B696 115 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm37988J3QM41 62 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 CckP09240 115 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Lyzl4Q9D925 145 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Higd1aQ9JLR9 95 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm11444F6QMA6 170 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Fam19a4Q7TPG5 135 aa13.2□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm10226O88253 85 aa13.19□□□□□ -0.3
Ptpra-201ENSMUST00000028769 1500011B03RikQ3TTH7 73 aa13.19□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Cysltr1Q99JA4 352 aa13.19□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ankrd39Q9D2X0 183 aa13.19□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Helz2E9QAM5 2947 aaKnown RBP13.19□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm20730A0A075B5J6 119 aa13.19□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Rpl36-ps4A0A140T8U4 117 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Rpl13aP19253 203 aaKnown RBP13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm9913Q8BQQ2 135 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ifitm10Q8BR26 201 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ccl25O35903 144 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Trav2Q5R1I9 109 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Polr2kQ63871 58 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Mapk1ip1lQ8BH93 242 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Prp2P05143 317 aa13.18□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Tspan13Q9D8C2 204 aa13.17□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Igkv4-91A0A075B5L2 119 aa13.17□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Lect2O88803 151 aa13.17□□□□□ -0.3
Ptpra-201ENSMUST00000028769 4930596D02RikQ3V0H9 216 aa13.17□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Q9D8Q6 235 aa13.17□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Reg3gO09049 174 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Sigmar1O55242 223 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 AngP21570 145 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Trav13d-1A0A075B606 110 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Defb47Q30KN1 79 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Samd5Q3V1H9 173 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Synj2bpQ9D6K5 145 aa13.16□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ighv1-52A0A0A6YXC3 117 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm7849D3YX03 116 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Mrpl35Q9CQL6 188 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 CubnQ9JLB4 3623 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Igkv4-69A0A0B4J1I6 116 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Gm11020F6ZGD5 61 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 P01802 115 aa13.15□□□□□ -0.3
Ptpra-201ENSMUST00000028769 Ube2e2Q91W82 201 aa13.14□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Ankrd17Q99NH0 2603 aaKnown RBP13.14□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Akap13E9Q394 2776 aa13.13□□□□□ -0.31
Ptpra-201ENSMUST00000028769 C2cd3Q52KB6 2323 aa13.13□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Defb45Q3V490 66 aa13.13□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Mpv17l2Q8VIK2 200 aa13.13□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Gemin7Q9CWY4 129 aa13.13□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Trav9n-2A0A0G2JDP3 113 aa13.13□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Gm10295Q8CCF3 114 aa13.12□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Ovol2Q8CIV7 274 aa13.12□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Rmi2Q3UPE3 149 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Pdzd2E9Q1M1 2796 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Ighv1-66A0A075B5X5 117 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Gm17455G3UW87 128 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Pglyrp1O88593 182 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Ccl24Q9JKC0 119 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Kmt2bO08550 2713 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Gm20499D3Z4G5 72 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Dpm2Q9Z324 84 aa13.11□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Gm10490F6VBM2 120 aa13.1□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Ighv12-3A0A075B5T1 117 aa13.09□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Spink1P09036 80 aa13.09□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Igkv4-62A0A0G2JDW9 117 aa13.09□□□□□ -0.31
Ptpra-201ENSMUST00000028769 TtrP07309 147 aa13.09□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Atp5lQ9CPQ8 103 aa13.09□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Crip2Q9DCT8 208 aaKnown RBP13.09□□□□□ -0.31
Ptpra-201ENSMUST00000028769 Cep192E9Q4Y4 2514 aaKnown RBP13.08□□□□□ -0.32
Ptpra-201ENSMUST00000028769 AI854703Q8BIN3 203 aa13.08□□□□□ -0.32
Ptpra-201ENSMUST00000028769 RetnQ99P87 114 aa13.08□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Xirp2Q4U4S6 3784 aa13.08□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Tmem263Q9DAM7 115 aa13.07□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Gm933J3QPC1 141 aa13.07□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Gm4861Q8C5A4 106 aa13.07□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Mfap4Q9D1H9 257 aa13.07□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Tenm3Q9WTS6 2715 aa13.06□□□□□ -0.32
Ptpra-201ENSMUST00000028769 B230217C12RikE9Q3Z1 139 aa13.06□□□□□ -0.32
Ptpra-201ENSMUST00000028769 A930009A15RikG3UYI6 118 aa13.06□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Gm7257D3YX25 99 aa13.06□□□□□ -0.32
Ptpra-201ENSMUST00000028769 A530064D06RikQ8BNV8 229 aa13.06□□□□□ -0.32
Ptpra-201ENSMUST00000028769 4930470P17RikQ9D542 155 aa13.06□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Gm6812B1AXU1 112 aa13.05□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Srp14P16254 110 aaKnown RBP13.05□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Defb18Q30KP5 85 aa13.05□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Ube2d1P61080 147 aaKnown RBP13.05□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Dmrt3Q80WT2 476 aa13.05□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Trbv16A0A0B4J1H3 115 aa13.04□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Gm45717A0A1B0GT68 152 aa13.04□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Fhl2O70433 279 aa13.04□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Klk1b4P00757 256 aa13.04□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Klhdc1Q80YG3 406 aa13.04□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Ighv1-72P01751 139 aa13.04□□□□□ -0.32
Ptpra-201ENSMUST00000028769 Trdv5A0A075B661 115 aa13.03□□□□□ -0.32
Ptpra-201ENSMUST00000028769 LeprotO89013 131 aa13.03□□□□□ -0.32
Ptpra-201ENSMUST00000028769 BC025920Q3US60 128 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms