RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Plac1Q9JI83 173 aa11.74□□□□□ -0.53
Upf1-202ENSMUST00000215817 Gm815Q3UWS2 115 aa11.73□□□□□ -0.53
Upf1-202ENSMUST00000215817 Ndufa3Q9CQ91 84 aa11.73□□□□□ -0.53
Upf1-202ENSMUST00000215817 Mrpl55Q9CZ83 127 aa11.73□□□□□ -0.53
Upf1-202ENSMUST00000215817 Rpl36-ps4A0A140T8U4 117 aa11.72□□□□□ -0.53
Upf1-202ENSMUST00000215817 Trav6n-6A0A075B6B2 114 aa11.72□□□□□ -0.53
Upf1-202ENSMUST00000215817 Myo15aQ9QZZ4 3511 aa11.72□□□□□ -0.53
Upf1-202ENSMUST00000215817 Kmt2bO08550 2713 aa11.72□□□□□ -0.53
Upf1-202ENSMUST00000215817 Ubr5Q80TP3 2792 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Umad1E0CX23 159 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Gm26727M0QWT1 121 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 P01748 117 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 9130213A22RikQ3V3T2 120 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Iah1Q9DB29 249 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Trav14n-3A0A075B645 120 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Hbb-bsA8DUK4 147 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Hbb-b1P02088 147 aa11.71□□□□□ -0.53
Upf1-202ENSMUST00000215817 Cox11Q6P8I6 275 aa11.71□□□□□ -0.54
Upf1-202ENSMUST00000215817 Cysltr1Q99JA4 352 aa11.71□□□□□ -0.54
Upf1-202ENSMUST00000215817 RetnQ99P87 114 aa11.71□□□□□ -0.54
Upf1-202ENSMUST00000215817 Ndufc2Q9CQ54 120 aa11.71□□□□□ -0.54
Upf1-202ENSMUST00000215817 SNORCQ9CXL7 121 aa11.71□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tep1P97499 2629 aa11.71□□□□□ -0.54
Upf1-202ENSMUST00000215817 Smim20D3Z7Q2 69 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tm2d1Q99MB3 208 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm10638F6QEG2 257 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 P01738 130 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 Phpt1Q9DAK9 124 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 Trav12d-3A0A075B6A4 115 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 Trbv3A0A0A6YYE2 117 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 IgipA0A1B0GR74 53 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 Runx1Q03347 451 aa11.7□□□□□ -0.54
Upf1-202ENSMUST00000215817 1810032O08RikE9PZV8 113 aa11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tcl1b4P56844 120 aa11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tex26Q0VB26 296 aa11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 Defb10Q8R2I8 73 aa11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 OtorQ9JIE3 128 aa11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 Sumo2P61957 95 aaKnown RBP11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 Slc25a48Q8BW66 306 aa11.69□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm5129F6YHA9 99 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tcrg-C1A0A075B5Z0 172 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Lyrm9Q3UN90 78 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tomm7Q9D173 55 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Stab1Q8R4Y4 2571 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 CckP09240 115 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 CrygcQ61597 174 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm26938S4R185 226 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm11020F6ZGD5 61 aa11.68□□□□□ -0.54
Upf1-202ENSMUST00000215817 Ighv1-49A0A0A6YWX2 117 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Shisa9Q9CZN4 424 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Tcte2E9PY37 120 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gp9O88186 177 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 P01659 112 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Dad1P61804 113 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Adgrg4B7ZCC9 3073 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Prelid3aQ8VE85 172 aa11.67□□□□□ -0.54
Upf1-202ENSMUST00000215817 Trav6-6A0A075B603 114 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm33815A0A087WNV3 176 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Dscaml1Q4VA61 2053 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 P01811 117 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Ly6c2P0CW03 131 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm5941Q497P9 117 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Dand5Q76LW6 185 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Clec5aQ9R007 190 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Gm9195A0A140LHT4 2805 aa11.66□□□□□ -0.54
Upf1-202ENSMUST00000215817 Rnf183Q8QZS5 190 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 Ormdl2Q9CQZ0 153 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 NpbQ8K4P1 119 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 Cysrt1Q9D1E4 142 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 Mrpl53Q9D1H8 118 aaKnown RBP11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 RhohQ9D3G9 191 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 Nhlrc1Q8BR37 401 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 Foxi1Q922I5 372 aa11.65□□□□□ -0.54
Upf1-202ENSMUST00000215817 4930447F04RikA2AFR2 126 aa11.65□□□□□ -0.55
Upf1-202ENSMUST00000215817 P01736 120 aa11.65□□□□□ -0.55
Upf1-202ENSMUST00000215817 Hcfc1Q61191 2045 aaKnown RBP11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Olfr745Q7TRL9 328 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Ly6g5bQ8K1T4 194 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Gm8439G3UWA7 96 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Hist1h4aP62806 103 aaKnown RBP11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 A930003A15RikQ3U552 87 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Nop10Q9CQS2 64 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Wfdc2Q9DAU7 174 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Gm20379A0A087WR34 119 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Trav9n-2A0A0G2JDP3 113 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Dmrt3Q80WT2 476 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Pradc1Q9D9N8 188 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Mlst8Q9DCJ1 326 aa11.64□□□□□ -0.55
Upf1-202ENSMUST00000215817 Ccl25O35903 144 aa11.63□□□□□ -0.55
Upf1-202ENSMUST00000215817 Cops9Q3U898 57 aa11.63□□□□□ -0.55
Upf1-202ENSMUST00000215817 CtsgP28293 261 aa11.63□□□□□ -0.55
Upf1-202ENSMUST00000215817 Rpl36aP83882 106 aaKnown RBP11.63□□□□□ -0.55
Upf1-202ENSMUST00000215817 Hbb-b2P02089 147 aa11.63□□□□□ -0.55
Upf1-202ENSMUST00000215817 GalmQ8K157 342 aa11.63□□□□□ -0.55
Upf1-202ENSMUST00000215817 NpsP0C0P8 89 aa11.62□□□□□ -0.55
Upf1-202ENSMUST00000215817 Tcf24V9GWT9 166 aa11.62□□□□□ -0.55
Upf1-202ENSMUST00000215817 Iglv1A0A075B663 117 aa11.62□□□□□ -0.55
Upf1-202ENSMUST00000215817 Tmem263Q9DAM7 115 aa11.62□□□□□ -0.55
Upf1-202ENSMUST00000215817 Fam222aQ6PGH4 453 aa11.61□□□□□ -0.55
Upf1-202ENSMUST00000215817 PmvkQ9D1G2 192 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms