RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Lgals4Q8K419 326 aa9.14□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Lypd8Q9D7S0 255 aa9.14□□□□□ -0.95
Ufd1-201ENSMUST00000005394 NpwA0A1L1STR8 176 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 1700020N15RikL7MTX3 112 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Socs3O35718 225 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 CntfrO88507 372 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Mrpl16Q99N93 251 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Arl3Q9WUL7 182 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ankhd1E9PUR0 2548 aaKnown RBP9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ighv1-31A0A0A6YWK5 117 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Igkv4-57A0A0A6YYE7 117 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 D930048N14RikA2AA67 225 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Nat8b-psE0CYC6 232 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Zfand3Q497H0 227 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Dtx1Q61010 627 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Spink2Q8BMY7 86 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Phlda3Q9WV95 125 aa9.13□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ighv3-3A0A0A6YWL2 116 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Gm42674D3YUT9 64 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Atp5lQ9CPQ8 103 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Tenm4Q3UHK6 2771 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Trav21-dv12A0A075B6C4 109 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ighv1-5A0A0A6YWG2 117 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Igkv4-70A0A0B4J1I5 116 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Esp24A8R0V6 68 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Foxi2Q3I5G5 311 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Odf1Q61999 247 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Gkn1Q9CR36 201 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Triap1Q9D8Z2 76 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Cxcl14Q9WUQ5 99 aa9.12□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Nav2E9Q842 2432 aa9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Gm6793B2RXM2 351 aa9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Gm2174F6ZVF2 133 aa9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Fhl1P97447 280 aaKnown RBP9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Csdc2Q91YQ3 154 aa9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 PmvkQ9D1G2 192 aa9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Map1aQ9QYR6 2776 aa9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Prrc2cQ3TLH4 2846 aaKnown RBP9.11□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ighv1-66A0A075B5X5 117 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Trbv17A0A140T8P8 114 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Casp6O08738 276 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Tex26Q0VB26 296 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Polr2kQ63871 58 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Zfp248Q640N4 576 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 SNORCQ9CXL7 121 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 BokO35425 213 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Rpl13aP19253 203 aaKnown RBP9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ifi27l2aQ8R412 90 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Mrpl36Q99N90 102 aa9.1□□□□□ -0.95
Ufd1-201ENSMUST00000005394 S100a4P07091 101 aa9.09□□□□□ -0.95
Ufd1-201ENSMUST00000005394 CckP09240 115 aa9.09□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Parm1Q923D3 296 aa9.09□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ighv1-82A0A0G2JEU7 117 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm933J3QPC1 141 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Cd52Q64389 74 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Morn5Q9DAI9 170 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Timm17aQ9Z0V8 171 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm11565A2A4M7 156 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Rpl32-psP17932 135 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ccl6P27784 116 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Cdkn1aP39689 159 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gpr82Q8BZR0 328 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Mrpl52Q9D0Y8 121 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Iah1Q9DB29 249 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 HilpdaQ9JLS0 64 aa9.08□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Egr2P08152 470 aa9.07□□□□□ -0.96
Ufd1-201ENSMUST00000005394 FshbQ60687 130 aa9.07□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Dpm3Q9D1Q4 92 aa9.07□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm10271F6WY25 52 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Mrps12O35680 139 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Arid1bE9Q4N7 2244 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ros1Q78DX7 2340 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 P01739 132 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ighv1-62-3P01754 117 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm9961Q8BNV2 113 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm9936Q8C864 160 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Atp6v0e1Q9CQD8 81 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Wfdc15bQ9JHY4 80 aa9.06□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Trav3-4A0A075B654 114 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ighv1-74A0A0G2JGK2 117 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 CrygdP04342 174 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Prok1Q14A28 105 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 4930442H23RikQ9D5G7 103 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Lyzl4Q9D925 145 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Q9DAQ5 155 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Qrich2A0A140LIY9 2337 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Svep1A2AVA0 3567 aa9.05□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ighv1-52A0A0A6YXC3 117 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ly6lH3BJG9 140 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm10135F6TEE5 83 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm2564F6Z9S8 108 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Nbl1Q61477 178 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Lyrm7Q9DA03 104 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Mettl26Q9DCS2 204 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 ApomQ9Z1R3 190 aa9.04□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Ighv1-64A0A075B5X3 117 aa9.03□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Igkv2-137A0A0B4J1H6 120 aa9.03□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Igkv20-101-2A0A0G2JDU3 113 aa9.03□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Gm904Q3V2L5 102 aa9.03□□□□□ -0.96
Ufd1-201ENSMUST00000005394 Q5BN45 167 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 82.9 ms