RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Smim13E9Q942 88 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Socs3O35718 225 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Fhl2O70433 279 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 P01728 117 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Defa6P50704 93 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ntn5Q3UQ22 452 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Olfr498Q8VEW2 330 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Atp6v0e2Q91XE7 81 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Mrpl33Q9CQP0 65 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 CrygfQ9CXV3 174 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Dnah14A0A140LIJ4 4489 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Iglv1A0A075B663 117 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav12d-3A0A075B6A4 115 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm7075D3Z497 112 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 PpyP10601 100 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ube2g1P62254 170 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Tmem136Q3TYE7 245 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 H2al1aQ5M8Q2 105 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Smim19Q80ZU4 107 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Csmd3Q80T79 3707 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 Defa9P50707 93 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 PgpQ8CHP8 321 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Vmn1r225Q8R2A5 298 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Lyg1Q9D7Q0 197 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Mlst8Q9DCJ1 326 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Dusp14Q9JLY7 198 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Smim10l1A0A087WNQ7 89 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm20379A0A087WR34 119 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm45521A0A1B0GRK0 198 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Esp24A8R0V6 68 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 6430550D23RikE9Q1X6 194 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Tmem86bQ497J1 226 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Cdkn2aQ64364 169 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Olfr1535Q7TQU0 326 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 TecrQ9CY27 308 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Mapk1ip1Q9D7G9 263 aa6.23□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv6-3A0A075B5T2 118 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trbv13-3A0A0B4J1H2 113 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav7-1A0A0G2JEV5 112 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 1520401A03RikA0A0J9YVH6 598 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Nat8b-psE0CYC6 232 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ebi3O35228 228 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Rpl13aP19253 203 aaKnown RBP6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Atp5eP56382 52 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 CrygeQ03740 174 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ang5Q5GAN1 145 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Spink2Q8BMY7 86 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Morn3Q8C5T4 241 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Olfr1394Q8VET2 312 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Olfr223Q8VF69 319 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Fam103a1Q9CQY2 119 aaKnown RBP6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Borcs7Q9CRC6 105 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gpr132Q9Z282 382 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Dpm2Q9Z324 84 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm29666A0A087WQ99 126 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm10337F7DEP7 55 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 P03980 138 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 TbpP29037 316 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm10604Q3V0X7 143 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Lypd6Q8BPP5 171 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 BaalcQ8VHV1 145 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Hyls1Q9CXX0 307 aa6.22□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm37389A0A0A6YW05 95 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 9430015G10RikA2ASP7 199 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm20532G3UXR8 106 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Rpl35aO55142 110 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm10334Q792Y8 246 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Vmn1r63Q9EPT1 300 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ighv14-1A0A075B5R4 117 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav13-4-dv7A0A075B6C2 110 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav13d-4A0A0G2JFX3 110 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 F11rO88792 300 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Psmg4P0C7N9 123 aa6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ube2l3P68037 154 aaKnown RBP6.21□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm28171A0A087WQ19 227 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Vamp8O70404 101 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 P0C913 63 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Il3raP26952 396 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Defa2P28309 93 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Defa24Q5G865 93 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Pradc1Q9D9N8 188 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav16d-dv11A0A075B617 117 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trav16nA0A075B634 117 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ighv1-12A0A0A6YXJ9 117 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trdv2-1A0A0G2JGB9 116 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 IgipA0A1B0GR74 53 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm14325A2AW67 498 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Defa35E9QLQ1 93 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 PrlhG3UWC3 86 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm20825J3QM67 227 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 P01736 120 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Thy1P01831 162 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gata1P17679 413 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Hint1P70349 126 aaKnown RBP6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Ssty2Q149W4 227 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Cks1brtQ3UNC9 96 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm21394Q497R7 227 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Trdv2-2Q5R1A4 116 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Gm20854Q62461 227 aa6.2□□□□□ -1.42
Trim39-205ENSMUST00000173369 Prss3Q792Z0 246 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms