RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Atp6v0e2Q91XE7 81 aa5.88□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Tmem210Q9D2F0 147 aa5.88□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Gm26938S4R185 226 aa5.88□□□□□ -1.47
Bdnf-203ENSMUST00000111043 OtogO55225 2910 aa5.88□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Nat8b-psE0CYC6 232 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 P04943 107 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Lynx1P0DP60 116 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Defa26Q3L180 93 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Odf3Q920N1 254 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Lyg1Q9D7Q0 197 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Gm17359A0A0G2JEB7 487 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 CntfrO88507 372 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Tcl1b4P56844 120 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Crip1P63254 77 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Samd5Q3V1H9 173 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ss18l2Q9D174 77 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Q9DAQ5 155 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ankrd17Q99NH0 2603 aaKnown RBP5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Gm15217A2CG07 155 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 7420426K07RikQ3UX66 186 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 BaalcQ8VHV1 145 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Atp5lQ9CPQ8 103 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Gemin7Q9CWY4 129 aa5.87□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Trbv31A0A075B5J5 111 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ighv1-31A0A0A6YWK5 117 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Dusp14Q9JLY7 198 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Trav9d-1A0A075B699 112 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 KprpB2RUR4 657 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Vsig4F6TUL9 280 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 P01756 117 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 P01757 117 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 P01794 123 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Cd52Q64389 74 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ifitm10Q8BR26 201 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Dpm2Q9Z324 84 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Usp9yF8VPU6 2556 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Fgf6P21658 208 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Svs5P30933 122 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Znf575Q3TXZ1 239 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 GaptQ8CB93 157 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 OtosQ8R448 89 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Fbxl15Q91W61 300 aa5.86□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Gm933J3QPC1 141 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ndufa1O35683 70 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Edn3P48299 214 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Crip3Q6Q6R3 243 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 B430305J03RikQ8BQQ8 176 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Tmem52Q9D702 196 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 PemtQ61907 199 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Rbfox3Q8BIF2 374 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Gpr82Q8BZR0 328 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Chd6A3KFM7 2711 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ighv5-8A0A075B676 92 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ighv3-4A0A0A6YXF1 117 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Brd3osA0A1B0GRB6 84 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Dlx6P70397 175 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 E130116L18RikQ8BMV6 101 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Morn3Q8C5T4 241 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Zfp119aQ9JIC0 545 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ovol1Q9WTJ2 267 aa5.85□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Ighv1-20A0A0A6YX66 117 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 1700067P10RikG3X8U2 183 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Erdr1J3QMM0 206 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Tcrg-C3L7N479 172 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 P03985 172 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Runx1Q03347 451 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Pradc1Q9D9N8 188 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Akap13E9Q394 2776 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Shisal2aA2A9G7 189 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 P04944 107 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Rpl11Q9CXW4 178 aaKnown RBP5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Arpc1aQ9R0Q6 370 aa5.84□□□□□ -1.47
Bdnf-203ENSMUST00000111043 Mustn1Q99JI1 82 aa5.84□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Timm23Q9WTQ8 209 aa5.84□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Tmem95P0DJF3 176 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Cd24P24807 76 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 SNORCQ9CXL7 121 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Defb18Q30KP5 85 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Mrpl16Q99N93 251 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 RhohQ9D3G9 191 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Rnf114Q9ET26 229 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Trav4n-4A0A075B615 110 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ighv1-23A0A0A6YVW3 117 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 P01725 110 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 A730015C16RikQ8C992 119 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm14137Q8CE97 175 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Cox6cQ9CPQ1 76 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Notch2O35516 2470 aa5.83□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ighv14-1A0A075B5R4 117 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm11444F6QMA6 170 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ccl21aP84444 133 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ccl21bP86792 133 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ccl21cP86793 133 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm9949Q8C9F4 104 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Fam24aQ8CF27 98 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Foxi1Q922I5 372 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Parm1Q923D3 296 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Ndufa4Q62425 82 aaKnown RBP5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Olfr312Q7TRZ9 308 aa5.82□□□□□ -1.48
Bdnf-203ENSMUST00000111043 Gm12689Q8BQU9 117 aa5.82□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms