RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W Q0010Q9ZZX9 128 aa3.34□□□□□ -1.87
UBP16YPL072W TOP1P04786 769 aa3.34□□□□□ -1.88
UBP16YPL072W RRP43P25359 394 aaPredicted RBP3.34□□□□□ -1.88
UBP16YPL072W IMD2P38697 523 aaKnown RBP3.34□□□□□ -1.88
UBP16YPL072W VPS8P39702 1274 aa3.34□□□□□ -1.88
UBP16YPL072W IDS2P46958 469 aa3.34□□□□□ -1.88
UBP16YPL072W IMD3P50095 523 aaKnown RBP3.34□□□□□ -1.88
UBP16YPL072W UBP16Q02863 499 aa3.34□□□□□ -1.88
UBP16YPL072W MRPL1Q04599 285 aa3.34□□□□□ -1.88
UBP16YPL072W TRI1Q05024 226 aa3.34□□□□□ -1.88
UBP16YPL072W ENT2Q05785 613 aa3.34□□□□□ -1.88
UBP16YPL072W SLX4Q12098 748 aa3.34□□□□□ -1.88
UBP16YPL072W PSF3Q12146 194 aa3.34□□□□□ -1.88
UBP16YPL072W KAR1P11927 433 aa3.33□□□□□ -1.88
UBP16YPL072W KGD2P19262 463 aaPredicted RBP3.33□□□□□ -1.88
UBP16YPL072W COQ3P27680 312 aa3.33□□□□□ -1.88
UBP16YPL072W KES1P35844 434 aaKnown RBP3.33□□□□□ -1.88
UBP16YPL072W YMR124WP39523 943 aaKnown RBP3.33□□□□□ -1.88
UBP16YPL072W NOP2P40991 618 aaKnown RBP3.33□□□□□ -1.88
UBP16YPL072W COG6P53959 839 aa3.33□□□□□ -1.88
UBP16YPL072W SNU56Q03782 492 aaKnown RBP3.33□□□□□ -1.88
UBP16YPL072W PLM2Q04383 521 aa3.33□□□□□ -1.88
UBP16YPL072W HER1Q12276 1246 aa3.33□□□□□ -1.88
UBP16YPL072W DBP10Q12389 995 aaKnown RBP3.33□□□□□ -1.88
UBP16YPL072W YCR061WP25639 631 aa3.32□□□□□ -1.88
UBP16YPL072W MGM1P32266 881 aa3.32□□□□□ -1.88
UBP16YPL072W PXL1P36166 706 aa3.32□□□□□ -1.88
UBP16YPL072W CIN1P40987 1014 aa3.32□□□□□ -1.88
UBP16YPL072W MEP2P41948 499 aa3.32□□□□□ -1.88
UBP16YPL072W YJR120WP47157 116 aa3.32□□□□□ -1.88
UBP16YPL072W RAD34Q06665 692 aa3.32□□□□□ -1.88
UBP16YPL072W YDL242WQ07746 117 aa3.32□□□□□ -1.88
UBP16YPL072W ILS1P09436 1072 aaKnown RBP3.31□□□□□ -1.88
UBP16YPL072W ENP1P38333 483 aaKnown RBP3.31□□□□□ -1.88
UBP16YPL072W LNP1P38878 278 aa3.31□□□□□ -1.88
UBP16YPL072W SAP1P39955 897 aaKnown RBP3.31□□□□□ -1.88
UBP16YPL072W VFA1P40080 203 aa3.31□□□□□ -1.88
UBP16YPL072W PUS4P48567 403 aaKnown RBP3.31□□□□□ -1.88
UBP16YPL072W LYS21Q12122 440 aaKnown RBP3.31□□□□□ -1.88
UBP16YPL072W YER175W-AQ8TGU4 54 aa3.31□□□□□ -1.88
UBP16YPL072W RTC1Q08281 1341 aa3.31□□□□□ -1.88
UBP16YPL072W YPT1P01123 206 aaKnown RBP3.3□□□□□ -1.88
UBP16YPL072W PRE2P30656 287 aaKnown RBP3.3□□□□□ -1.88
UBP16YPL072W GRX7P38068 203 aa3.3□□□□□ -1.88
UBP16YPL072W PAF1P38351 445 aa3.3□□□□□ -1.88
UBP16YPL072W ARO9P38840 513 aaPredicted RBP3.3□□□□□ -1.88
UBP16YPL072W RPL15BP54780 204 aaPredicted RBP3.3□□□□□ -1.88
UBP16YPL072W TRS31Q03337 283 aa3.3□□□□□ -1.88
UBP16YPL072W PHM6Q05637 104 aa3.3□□□□□ -1.88
UBP16YPL072W PHO3P24031 467 aa3.29□□□□□ -1.88
UBP16YPL072W YCP4P25349 247 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W TGL1P34163 548 aa3.29□□□□□ -1.88
UBP16YPL072W TAF5P38129 798 aa3.29□□□□□ -1.88
UBP16YPL072W SCS2P40075 244 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W POL31P46957 487 aa3.29□□□□□ -1.88
UBP16YPL072W LSC1P53598 329 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W AAT1Q01802 451 aa3.29□□□□□ -1.88
UBP16YPL072W YML053CQ04978 212 aa3.29□□□□□ -1.88
UBP16YPL072W YOR389WQ08912 624 aa3.29□□□□□ -1.88
UBP16YPL072W GET3Q12154 354 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W SES1P07284 462 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W VAS1P07806 1104 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W AIM17P23180 465 aaKnown RBP3.29□□□□□ -1.88
UBP16YPL072W TFC4P33339 1025 aa3.29□□□□□ -1.88
UBP16YPL072W YLF2P38746 405 aa3.29□□□□□ -1.88
UBP16YPL072W FLO5P38894 1075 aa3.29□□□□□ -1.88
UBP16YPL072W PEX14P53112 341 aa3.29□□□□□ -1.88
UBP16YPL072W YAT1P80235 687 aa3.29□□□□□ -1.88
UBP16YPL072W NUP53Q03790 475 aa3.29□□□□□ -1.88
UBP16YPL072W ARA2Q04212 335 aa3.29□□□□□ -1.88
UBP16YPL072W YPL191CQ08930 360 aa3.29□□□□□ -1.88
UBP16YPL072W CTT1P06115 562 aa3.28□□□□□ -1.88
UBP16YPL072W MRC1P25588 1096 aa3.28□□□□□ -1.88
UBP16YPL072W SDS22P36047 338 aa3.28□□□□□ -1.88
UBP16YPL072W TOM71P38825 639 aaKnown RBP3.28□□□□□ -1.88
UBP16YPL072W VTC3Q02725 835 aa3.28□□□□□ -1.88
UBP16YPL072W CRF1Q04930 467 aa3.28□□□□□ -1.88
UBP16YPL072W CRD1Q07560 283 aa3.28□□□□□ -1.88
UBP16YPL072W GAL4P04386 881 aa3.27□□□□□ -1.89
UBP16YPL072W RPT3P33298 428 aaKnown RBP3.27□□□□□ -1.89
UBP16YPL072W VBA2P38358 474 aaKnown RBP3.27□□□□□ -1.89
UBP16YPL072W ARB1P40024 610 aaKnown RBP3.27□□□□□ -1.89
UBP16YPL072W CNM67P53865 581 aaKnown RBP3.27□□□□□ -1.89
UBP16YPL072W ACS1Q01574 713 aa3.27□□□□□ -1.89
UBP16YPL072W YOL057WQ08225 711 aa3.27□□□□□ -1.89
UBP16YPL072W NUR1Q12066 484 aa3.27□□□□□ -1.89
UBP16YPL072W ATX2Q12067 313 aa3.27□□□□□ -1.89
UBP16YPL072W ADH4P10127 382 aa3.26□□□□□ -1.89
UBP16YPL072W RPS7AP26786 190 aaKnown RBP3.26□□□□□ -1.89
UBP16YPL072W ATO2P32907 282 aa3.26□□□□□ -1.89
UBP16YPL072W ERV46P39727 415 aa3.26□□□□□ -1.89
UBP16YPL072W SAW1P39735 261 aa3.26□□□□□ -1.89
UBP16YPL072W MDV1P47025 714 aa3.26□□□□□ -1.89
UBP16YPL072W LYS20P48570 428 aaKnown RBP3.26□□□□□ -1.89
UBP16YPL072W SUB1P54000 292 aaKnown RBP3.26□□□□□ -1.89
UBP16YPL072W VPS64Q03944 604 aa3.26□□□□□ -1.89
UBP16YPL072W SRL1Q08673 210 aa3.26□□□□□ -1.89
UBP16YPL072W GSH1P32477 678 aa3.25□□□□□ -1.89
UBP16YPL072W RPF2P36160 344 aaKnown RBP3.25□□□□□ -1.89
UBP16YPL072W IMA5P40884 581 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms