RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C GYP6P32806 458 aa2.39□□□□□ -2.03
SCD5YOR329C SGE1P33335 543 aa2.39□□□□□ -2.03
SCD5YOR329C HEK2P38199 381 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03 RIP-Chip
SCD5YOR329C BIT2P38346 545 aa2.39□□□□□ -2.03
SCD5YOR329C HSM3P38348 480 aa2.39□□□□□ -2.03
SCD5YOR329C STB5P38699 743 aa2.39□□□□□ -2.03
SCD5YOR329C FLC2P39719 783 aa2.39□□□□□ -2.03
SCD5YOR329C DLD2P46681 530 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C GCD14P46959 383 aaPredicted RBP2.39□□□□□ -2.03
SCD5YOR329C PET130P47065 347 aa2.39□□□□□ -2.03
SCD5YOR329C SCS3P53012 380 aa2.39□□□□□ -2.03
SCD5YOR329C NUT1P53114 1132 aa2.39□□□□□ -2.03
SCD5YOR329C PEX8P53248 589 aa2.39□□□□□ -2.03
SCD5YOR329C UBX4P54730 416 aa2.39□□□□□ -2.03
SCD5YOR329C CDC14Q00684 551 aa2.39□□□□□ -2.03
SCD5YOR329C SPO71Q03868 1245 aa2.39□□□□□ -2.03
SCD5YOR329C SHE9Q04172 456 aa2.39□□□□□ -2.03
SCD5YOR329C HEL2Q05580 639 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C UTP13Q05946 817 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C PIG1Q06216 648 aa2.39□□□□□ -2.03
SCD5YOR329C LDB18Q07887 179 aa2.39□□□□□ -2.03
SCD5YOR329C CMS1Q07897 291 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C LEA1Q08963 238 aaPredicted RBP2.39□□□□□ -2.03
SCD5YOR329C YOR223WQ12015 292 aa2.39□□□□□ -2.03
SCD5YOR329C ARP7Q12406 477 aa2.39□□□□□ -2.03
SCD5YOR329C APM4Q99186 491 aa2.39□□□□□ -2.03
SCD5YOR329C YMR085WP0CF18 432 aa2.39□□□□□ -2.03
SCD5YOR329C ERR1P0CX10 437 aa2.39□□□□□ -2.03
SCD5YOR329C ERR2P0CX11 437 aa2.39□□□□□ -2.03
SCD5YOR329C RPL4AP10664 362 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C INO1P11986 533 aa2.39□□□□□ -2.03
SCD5YOR329C PUF4P25339 888 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SCD5YOR329C EMC1P25574 760 aa2.39□□□□□ -2.03
SCD5YOR329C PGS1P25578 521 aa2.39□□□□□ -2.03
SCD5YOR329C MGT1P26188 188 aa2.39□□□□□ -2.03
SCD5YOR329C TPS2P31688 896 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C PSE1P32337 1089 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C RPC82P32349 654 aa2.39□□□□□ -2.03
SCD5YOR329C SRP101P32916 621 aa2.39□□□□□ -2.03
SCD5YOR329C CSE2P33308 149 aa2.39□□□□□ -2.03
SCD5YOR329C TFC3P34111 1160 aa2.39□□□□□ -2.03
SCD5YOR329C CTF13P35203 478 aa2.39□□□□□ -2.03
SCD5YOR329C HSL7P38274 827 aa2.39□□□□□ -2.03
SCD5YOR329C FZO1P38297 855 aa2.39□□□□□ -2.03
SCD5YOR329C SMF2P38778 549 aa2.39□□□□□ -2.03
SCD5YOR329C LIN1P38852 340 aaPredicted RBP2.39□□□□□ -2.03
SCD5YOR329C TVP23P38962 199 aa2.39□□□□□ -2.03
SCD5YOR329C SAW1P39735 261 aa2.39□□□□□ -2.03
SCD5YOR329C IAH1P41734 238 aa2.39□□□□□ -2.03
SCD5YOR329C ERR3P42222 437 aa2.39□□□□□ -2.03
SCD5YOR329C TDA10P42938 290 aa2.39□□□□□ -2.03
SCD5YOR329C CCT7P42943 550 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C RPL4BP49626 362 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C ZIP2P53061 704 aa2.39□□□□□ -2.03
SCD5YOR329C MET13P53128 600 aa2.39□□□□□ -2.03
SCD5YOR329C YNL034WP53963 612 aa2.39□□□□□ -2.03
SCD5YOR329C YNL018CP53976 612 aa2.39□□□□□ -2.03
SCD5YOR329C MTD1Q02046 320 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C NHP10Q03435 203 aa2.39□□□□□ -2.03
SCD5YOR329C NUT2Q06213 157 aa2.39□□□□□ -2.03
SCD5YOR329C YLR177WQ06251 628 aa2.39□□□□□ -2.03
SCD5YOR329C CDD1Q06549 142 aa2.39□□□□□ -2.03
SCD5YOR329C RCL1Q08096 367 aaPredicted RBP2.39□□□□□ -2.03
SCD5YOR329C YOR059CQ08448 450 aaKnown RBP2.39□□□□□ -2.03
SCD5YOR329C TGL5Q12043 749 aa2.39□□□□□ -2.03
SCD5YOR329C EMP46Q12396 444 aa2.39□□□□□ -2.03
SCD5YOR329C RRD2Q12461 358 aa2.39□□□□□ -2.03
SCD5YOR329C YOL087CQ99247 1116 aa2.39□□□□□ -2.03
SCD5YOR329C TOM1Q03280 3268 aa2.39□□□□□ -2.03
SCD5YOR329C ENO2P00925 437 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C RSR1P13856 272 aa2.38□□□□□ -2.03
SCD5YOR329C YIH1P25637 258 aa2.38□□□□□ -2.03
SCD5YOR329C ADD66P36040 267 aa2.38□□□□□ -2.03
SCD5YOR329C STB6P36085 766 aa2.38□□□□□ -2.03
SCD5YOR329C YKR051WP36142 418 aa2.38□□□□□ -2.03
SCD5YOR329C MRPL40P36534 297 aa2.38□□□□□ -2.03
SCD5YOR329C CBR1P38626 284 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C SRP68P38687 599 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C DMA1P38823 416 aa2.38□□□□□ -2.03
SCD5YOR329C STN1P38960 494 aa2.38□□□□□ -2.03
SCD5YOR329C MNN1P39106 762 aa2.38□□□□□ -2.03
SCD5YOR329C NUP60P39705 539 aa2.38□□□□□ -2.03
SCD5YOR329C YAT2P40017 923 aa2.38□□□□□ -2.03
SCD5YOR329C RPT2P40327 437 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C OPT1P40897 799 aa2.38□□□□□ -2.03
SCD5YOR329C YFL052WP43551 465 aa2.38□□□□□ -2.03
SCD5YOR329C ROK1P45818 564 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C BUD13P46947 266 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C ILM1P47155 203 aa2.38□□□□□ -2.03
SCD5YOR329C TEL2P53038 688 aa2.38□□□□□ -2.03
SCD5YOR329C SUB1P54000 292 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C TGL2P54857 326 aa2.38□□□□□ -2.03
SCD5YOR329C TOF2Q02208 771 aa2.38□□□□□ -2.03
SCD5YOR329C YPL014WQ02606 381 aa2.38□□□□□ -2.03
SCD5YOR329C YPL109CQ02981 657 aa2.38□□□□□ -2.03
SCD5YOR329C USA1Q03714 838 aa2.38□□□□□ -2.03
SCD5YOR329C SNU56Q03782 492 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C GSF2Q04697 403 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C GTB1Q04924 702 aa2.38□□□□□ -2.03
SCD5YOR329C HRD3Q05787 833 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms