RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W SNF5P18480 905 aa3.33□□□□□ -1.88
MSH2YOL090W CLB1P24868 471 aa3.33□□□□□ -1.88
MSH2YOL090W GYP6P32806 458 aa3.33□□□□□ -1.88
MSH2YOL090W TEF4P36008 412 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W SET5P38890 526 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W OSW5P40219 148 aa3.33□□□□□ -1.88
MSH2YOL090W CEP3P40969 608 aa3.33□□□□□ -1.88
MSH2YOL090W SHR5P41912 237 aa3.33□□□□□ -1.88
MSH2YOL090W SOK2P53438 785 aaPredicted RBP3.33□□□□□ -1.88
MSH2YOL090W SNF12P53628 566 aa3.33□□□□□ -1.88
MSH2YOL090W RPT6Q01939 405 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W SKG3Q06315 1026 aa3.33□□□□□ -1.88
MSH2YOL090W PML1Q07930 204 aaPredicted RBP3.33□□□□□ -1.88
MSH2YOL090W COX17Q12287 69 aa3.33□□□□□ -1.88
MSH2YOL090W ZRT2Q12436 422 aa3.33□□□□□ -1.88
MSH2YOL090W GPM1P00950 247 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W DBP3P20447 523 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W RPN2P32565 945 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W SMI1P32566 505 aa3.33□□□□□ -1.88
MSH2YOL090W MTC7P32633 139 aa3.33□□□□□ -1.88
MSH2YOL090W YAP3P38749 330 aa3.33□□□□□ -1.88
MSH2YOL090W UTP9P38882 575 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W TIF4631P39935 952 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W BST1P43571 1029 aa3.33□□□□□ -1.88
MSH2YOL090W JJJ1P53863 590 aa3.33□□□□□ -1.88
MSH2YOL090W MMR1Q06324 491 aa3.33□□□□□ -1.88
MSH2YOL090W YDL073WQ07454 984 aa3.33□□□□□ -1.88
MSH2YOL090W AAD4Q07747 329 aa3.33□□□□□ -1.88
MSH2YOL090W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
MSH2YOL090W RSB1Q08417 382 aa3.33□□□□□ -1.88
MSH2YOL090W ICL2Q12031 575 aa3.33□□□□□ -1.88
MSH2YOL090W SPE3Q12074 293 aaKnown RBP3.33□□□□□ -1.88
MSH2YOL090W SUI2P20459 304 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W URA7P28274 579 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W ARP2P32381 391 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W RPD3P32561 433 aa3.32□□□□□ -1.88
MSH2YOL090W ADH5P38113 351 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W SMF1P38925 575 aa3.32□□□□□ -1.88
MSH2YOL090W BUD16P39988 312 aa3.32□□□□□ -1.88
MSH2YOL090W RPN3P40016 523 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W MRX1P40050 688 aa3.32□□□□□ -1.88
MSH2YOL090W TED1P40533 473 aa3.32□□□□□ -1.88
MSH2YOL090W YJL045WP47052 634 aa3.32□□□□□ -1.88
MSH2YOL090W TCB2P48231 1178 aa3.32□□□□□ -1.88
MSH2YOL090W ART5P53244 586 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W RAD30Q04049 632 aa3.32□□□□□ -1.88
MSH2YOL090W RIX7Q07844 837 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W XYL2Q07993 356 aa3.32□□□□□ -1.88
MSH2YOL090W GPR1Q12361 961 aa3.32□□□□□ -1.88
MSH2YOL090W SKM1Q12469 655 aa3.32□□□□□ -1.88
MSH2YOL090W SEC53P07283 254 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W BIK1P11709 440 aa3.32□□□□□ -1.88
MSH2YOL090W ARG1P22768 420 aa3.32□□□□□ -1.88
MSH2YOL090W HEL1P36113 551 aa3.32□□□□□ -1.88
MSH2YOL090W ZIM17P42844 174 aa3.32□□□□□ -1.88
MSH2YOL090W AGX1P43567 385 aa3.32□□□□□ -1.88
MSH2YOL090W ARC1P46672 376 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W ARX1Q03862 593 aaKnown RBP3.32□□□□□ -1.88
MSH2YOL090W YDR444WQ04093 687 aa3.32□□□□□ -1.88
MSH2YOL090W YPR172WQ06608 200 aa3.32□□□□□ -1.88
MSH2YOL090W MLH2Q07980 695 aa3.32□□□□□ -1.88
MSH2YOL090W GPM3Q12326 303 aa3.32□□□□□ -1.88
MSH2YOL090W YBR126W-AQ8TGU7 68 aa3.32□□□□□ -1.88
MSH2YOL090W URA3P03962 267 aa3.31□□□□□ -1.88
MSH2YOL090W CBS1P14066 229 aa3.31□□□□□ -1.88
MSH2YOL090W TRK2P28584 889 aa3.31□□□□□ -1.88
MSH2YOL090W MIP6P38760 659 aaKnown RBP3.31□□□□□ -1.88
MSH2YOL090W SSP120P39931 234 aaKnown RBP3.31□□□□□ -1.88
MSH2YOL090W GIP2P40036 548 aa3.31□□□□□ -1.88
MSH2YOL090W MET18P40469 1032 aa3.31□□□□□ -1.88
MSH2YOL090W STU2P46675 888 aa3.31□□□□□ -1.88
MSH2YOL090W AIP1P46680 615 aaKnown RBP3.31□□□□□ -1.88
MSH2YOL090W FOL2P51601 243 aaKnown RBP3.31□□□□□ -1.88
MSH2YOL090W SHE10P53075 577 aa3.31□□□□□ -1.88
MSH2YOL090W COG1P53079 417 aa3.31□□□□□ -1.88
MSH2YOL090W MNP1P53163 194 aaPredicted RBP3.31□□□□□ -1.88
MSH2YOL090W TRI1Q05024 226 aa3.31□□□□□ -1.88
MSH2YOL090W FMP45Q07651 309 aa3.31□□□□□ -1.88
MSH2YOL090W ATG11Q12527 1178 aa3.31□□□□□ -1.88
MSH2YOL090W YOR111WQ99210 232 aa3.31□□□□□ -1.88
MSH2YOL090W STE12P13574 688 aa3.31□□□□□ -1.88
MSH2YOL090W OM45P16547 393 aa3.31□□□□□ -1.88
MSH2YOL090W FPS1P23900 669 aa3.31□□□□□ -1.88
MSH2YOL090W SAP190P36123 1033 aa3.31□□□□□ -1.88
MSH2YOL090W TAF5P38129 798 aa3.31□□□□□ -1.88
MSH2YOL090W YHR097CP38809 366 aaKnown RBP3.31□□□□□ -1.88
MSH2YOL090W YHR131CP38835 850 aa3.31□□□□□ -1.88
MSH2YOL090W FLC2P39719 783 aa3.31□□□□□ -1.88
MSH2YOL090W SPO1P53541 631 aa3.31□□□□□ -1.88
MSH2YOL090W YKR011CQ02209 353 aa3.31□□□□□ -1.88
MSH2YOL090W YMR265CQ03508 461 aaKnown RBP3.31□□□□□ -1.88
MSH2YOL090W ASM4Q05166 528 aa3.31□□□□□ -1.88
MSH2YOL090W HUA2Q12134 243 aa3.31□□□□□ -1.88
MSH2YOL090W PRC1P00729 532 aa3.3□□□□□ -1.88
MSH2YOL090W CDC24P11433 854 aaPredicted RBP3.3□□□□□ -1.88
MSH2YOL090W LAT1P12695 482 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W NIP1P32497 812 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W RMA1P36001 430 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W HSM3P38348 480 aa3.3□□□□□ -1.88
MSH2YOL090W RAD17P48581 401 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms