RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C OCA4P25366 362 aa3.27□□□□□ -1.89
SSN8YNL025C PER1P25625 357 aa3.27□□□□□ -1.89
SSN8YNL025C SWC3P31376 625 aa3.27□□□□□ -1.89
SSN8YNL025C CCR4P31384 837 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C CBF2P32504 956 aa3.27□□□□□ -1.89
SSN8YNL025C TGL1P34163 548 aa3.27□□□□□ -1.89
SSN8YNL025C TEF4P36008 412 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C OAF3P36023 863 aa3.27□□□□□ -1.89
SSN8YNL025C LAS1P36146 502 aaPredicted RBP3.27□□□□□ -1.89
SSN8YNL025C ESL2P36168 1195 aa3.27□□□□□ -1.89
SSN8YNL025C SRP68P38687 599 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C YHR078WP38799 552 aa3.27□□□□□ -1.89
SSN8YNL025C RTS1P38903 757 aa3.27□□□□□ -1.89
SSN8YNL025C AXL2P38928 823 aa3.27□□□□□ -1.89
SSN8YNL025C HXT6P39003 570 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C HXT7P39004 570 aa3.27□□□□□ -1.89
SSN8YNL025C NPR2P39923 615 aa3.27□□□□□ -1.89
SSN8YNL025C SSP120P39931 234 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C YEL025CP39991 1188 aa3.27□□□□□ -1.89
SSN8YNL025C PRM2P40534 656 aa3.27□□□□□ -1.89
SSN8YNL025C IMA5P40884 581 aa3.27□□□□□ -1.89
SSN8YNL025C ZIM17P42844 174 aa3.27□□□□□ -1.89
SSN8YNL025C PUS4P48567 403 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C CTF18P49956 741 aa3.27□□□□□ -1.89
SSN8YNL025C AMA1P50082 593 aa3.27□□□□□ -1.89
SSN8YNL025C GND2P53319 492 aa3.27□□□□□ -1.89
SSN8YNL025C ARC35P53731 342 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C ALF1P53904 254 aa3.27□□□□□ -1.89
SSN8YNL025C ARP5P53946 755 aa3.27□□□□□ -1.89
SSN8YNL025C ERV25P54837 211 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C TIM10P87108 93 aa3.27□□□□□ -1.89
SSN8YNL025C YMR206WQ03695 313 aa3.27□□□□□ -1.89
SSN8YNL025C PSF3Q12146 194 aa3.27□□□□□ -1.89
SSN8YNL025C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SSN8YNL025C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SSN8YNL025C FRE6Q12473 712 aa3.27□□□□□ -1.89
SSN8YNL025C YIL002W-AQ3E7Z5 69 aa3.27□□□□□ -1.89
SSN8YNL025C PHO5P00635 467 aa3.26□□□□□ -1.89
SSN8YNL025C ARG3P05150 338 aa3.26□□□□□ -1.89
SSN8YNL025C CAF20P12962 161 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C KAR3P17119 729 aa3.26□□□□□ -1.89
SSN8YNL025C PET123P17558 318 aa3.26□□□□□ -1.89
SSN8YNL025C RPB4P20433 221 aaPredicted RBP3.26□□□□□ -1.89
SSN8YNL025C PRP22P24384 1145 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C GRR1P24814 1151 aa3.26□□□□□ -1.89
SSN8YNL025C ROX1P25042 368 aa3.26□□□□□ -1.89
SSN8YNL025C SEC65P29478 273 aa3.26□□□□□ -1.89
SSN8YNL025C GPI10P30777 616 aa3.26□□□□□ -1.89
SSN8YNL025C EFB1P32471 206 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C RPD3P32561 433 aa3.26□□□□□ -1.89
SSN8YNL025C GYP6P32806 458 aa3.26□□□□□ -1.89
SSN8YNL025C LOT5P34234 306 aa3.26□□□□□ -1.89
SSN8YNL025C DAD2P36162 133 aa3.26□□□□□ -1.89
SSN8YNL025C RPP1P38786 293 aa3.26□□□□□ -1.89
SSN8YNL025C YIL161WP40449 235 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C GCD10P41814 478 aa3.26□□□□□ -1.89
SSN8YNL025C SSU1P41930 458 aa3.26□□□□□ -1.89
SSN8YNL025C AGX1P43567 385 aa3.26□□□□□ -1.89
SSN8YNL025C ENP2P48234 707 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C SPO1P53541 631 aa3.26□□□□□ -1.89
SSN8YNL025C ARE2P53629 642 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C CPR6P53691 371 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C MOT3P54785 490 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C OAZ1Q02803 292 aa3.26□□□□□ -1.89
SSN8YNL025C FDC1Q03034 503 aa3.26□□□□□ -1.89
SSN8YNL025C YDR131CQ03899 556 aa3.26□□□□□ -1.89
SSN8YNL025C ARV1Q06541 321 aa3.26□□□□□ -1.89
SSN8YNL025C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SSN8YNL025C TRM8Q12009 286 aa3.26□□□□□ -1.89
SSN8YNL025C RTC5Q12108 567 aaKnown RBP3.26□□□□□ -1.89
SSN8YNL025C DCS2Q12123 353 aa3.26□□□□□ -1.89
SSN8YNL025C RTN2Q12443 393 aa3.26□□□□□ -1.89
SSN8YNL025C PCD1Q12524 340 aa3.26□□□□□ -1.89
SSN8YNL025C CHD1P32657 1468 aa3.25□□□□□ -1.89
SSN8YNL025C CTT1P06115 562 aa3.25□□□□□ -1.89
SSN8YNL025C PET111P08468 800 aa3.25□□□□□ -1.89
SSN8YNL025C RPS21AP0C0V8 87 aaKnown RBP3.25□□□□□ -1.89
SSN8YNL025C YML002WP0CF17 737 aa3.25□□□□□ -1.89
SSN8YNL025C GUK1P15454 187 aaKnown RBP3.25□□□□□ -1.89
SSN8YNL025C POL4P25615 582 aa3.25□□□□□ -1.89
SSN8YNL025C ADK2P26364 225 aa3.25□□□□□ -1.89
SSN8YNL025C PEP3P27801 918 aa3.25□□□□□ -1.89
SSN8YNL025C ARC19P33204 171 aaKnown RBP3.25□□□□□ -1.89
SSN8YNL025C YKR075CP36155 307 aa3.25□□□□□ -1.89
SSN8YNL025C PPS1P38148 807 aa3.25□□□□□ -1.89
SSN8YNL025C YBL029WP38201 376 aa3.25□□□□□ -1.89
SSN8YNL025C GDT1P38301 280 aaPredicted RBP3.25□□□□□ -1.89
SSN8YNL025C PEX18P38855 283 aa3.25□□□□□ -1.89
SSN8YNL025C YHR202WP38887 602 aa3.25□□□□□ -1.89
SSN8YNL025C PUG1P40100 303 aa3.25□□□□□ -1.89
SSN8YNL025C CEP3P40969 608 aa3.25□□□□□ -1.89
SSN8YNL025C LYS14P40971 790 aa3.25□□□□□ -1.89
SSN8YNL025C YFL052WP43551 465 aa3.25□□□□□ -1.89
SSN8YNL025C ALY2P47029 1046 aa3.25□□□□□ -1.89
SSN8YNL025C MDE1P47095 244 aa3.25□□□□□ -1.89
SSN8YNL025C BPL1P48445 690 aaPredicted RBP3.25□□□□□ -1.89
SSN8YNL025C PIL1P53252 339 aaKnown RBP3.25□□□□□ -1.89
SSN8YNL025C ASI2P53895 289 aa3.25□□□□□ -1.89
SSN8YNL025C YPL107WQ02873 248 aa3.25□□□□□ -1.89
SSN8YNL025C GYL1Q04322 720 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms