RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	COP1	P53622	1201 aa	Known RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	BNI4	P53858	892 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	PEX13	P80667	386 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	DAL4	Q04895	635 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	YDR222W	Q04925	415 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	YSH1	Q06224	779 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	AIM39	Q08223	395 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	SEN1	Q00416	2231 aa	Known RBP	4.86	□□□□□ -1.63
ATM1	YMR301C	CDC34	P14682	295 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	PUT4	P15380	627 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	EST1	P17214	699 aa	Predicted RBP	4.86	□□□□□ -1.63
ATM1	YMR301C	SEC1	P30619	724 aa	Known RBP	4.86	□□□□□ -1.63
ATM1	YMR301C	TFB1	P32776	642 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	SRX1	P36077	127 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	SNZ3	P43545	298 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	SNZ2	P53824	298 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	AQR1	P53943	586 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	ARA2	Q04212	335 aa		4.86	□□□□□ -1.63
ATM1	YMR301C	CCR4	P31384	837 aa	Known RBP	4.85	□□□□□ -1.63
ATM1	YMR301C	ABD1	P32783	436 aa	Predicted RBP	4.85	□□□□□ -1.63
ATM1	YMR301C	TDA3	P38758	523 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	FAA3	P39002	694 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	VFA1	P40080	203 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	YJR061W	P40355	935 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	TMA108	P40462	946 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	EMW1	P42842	904 aa	Known RBP	4.85	□□□□□ -1.63
ATM1	YMR301C	UME1	Q03010	460 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	LCB5	Q06147	687 aa	Known RBP	4.85	□□□□□ -1.63
ATM1	YMR301C	AAD4	Q07747	329 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	YLR012C	Q07927	99 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	PER33	Q12144	273 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	AIR2	Q12476	344 aa	Known RBP	4.85	□□□□□ -1.63
ATM1	YMR301C	VPS5	Q92331	675 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	PRI2	P20457	528 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	MSP1	P28737	362 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	MKS1	P34072	584 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	JNM1	P36224	373 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	CRP1	P38845	465 aa	Known RBP	4.85	□□□□□ -1.63
ATM1	YMR301C	RTT107	P38850	1070 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	SAK1	P38990	1142 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	SER33	P40510	469 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	SNG1	P46950	547 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	AMA1	P50082	593 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	NUP84	P52891	726 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	BET4	Q00618	327 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	YMR187C	Q03236	431 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	RKM2	Q03942	479 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	OPI10	Q08202	246 aa		4.85	□□□□□ -1.63
ATM1	YMR301C	THI4	P32318	326 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	PYC2	P32327	1180 aa	Known RBP	4.84	□□□□□ -1.63
ATM1	YMR301C	YKL050C	P35736	922 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	LAM1	P38851	1228 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	TAT2	P38967	592 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	PTC2	P39966	464 aa	Known RBP	4.84	□□□□□ -1.63
ATM1	YMR301C	SPF1	P39986	1215 aa	Known RBP	4.84	□□□□□ -1.63
ATM1	YMR301C	EDC3	P39998	551 aa	Known RBP	4.84	□□□□□ -1.63
ATM1	YMR301C	SAP185	P40856	1058 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	MNN10	P50108	393 aa	Known RBP	4.84	□□□□□ -1.63
ATM1	YMR301C	PEX31	P53203	462 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	PIR1	Q03178	341 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	ADI1	Q03677	179 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	YLR046C	Q12253	270 aa		4.84	□□□□□ -1.63
ATM1	YMR301C	DAL81	P21657	970 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	ADY2	P25613	283 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	FSH1	P38777	243 aa	Known RBP	4.84	□□□□□ -1.64
ATM1	YMR301C	LYS9	P38999	446 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	PRM9	P39551	298 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	YIL054W	P40524	105 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	YPS6	P40583	537 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	AIM23	P47015	356 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	MRX6	P48564	524 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	YGR111W	P53265	400 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	CLU1	Q03690	1277 aa	Known RBP	4.84	□□□□□ -1.64
ATM1	YMR301C	YLR287C	Q05881	355 aa		4.84	□□□□□ -1.64
ATM1	YMR301C	CLP1	Q08685	445 aa	Predicted RBP	4.84	□□□□□ -1.64
ATM1	YMR301C	RRP6	Q12149	733 aa	Known RBP	4.84	□□□□□ -1.64
ATM1	YMR301C	MOD5	P07884	428 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	GAL11	P19659	1081 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	VMA3	P25515	160 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	GEX1	P25596	615 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	PXA2	P34230	853 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	GEX2	P36173	615 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	MRPL40	P36534	297 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	NCL1	P38205	684 aa	Known RBP	4.83	□□□□□ -1.64
ATM1	YMR301C	PFS1	P38872	237 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	STL1	P39932	569 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	TMN3	P40071	706 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	TIF34	P40217	347 aa	Known RBP	4.83	□□□□□ -1.64
ATM1	YMR301C	TY4A-J	P47023	414 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	YJR115W	P47152	169 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	EMC4	P53073	190 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	YGR053C	P53234	283 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	YNR063W	P53749	607 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	EAF1	Q06337	982 aa		4.83	□□□□□ -1.64
ATM1	YMR301C	HIS1	P00498	297 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	PYC1	P11154	1178 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	RPS0A	P32905	252 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	IRS4	P36115	615 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	YHR078W	P38799	552 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	YEN1	P40028	759 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms