RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeast

Gene VTI1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTI1	YMR197C	GAL4	P04386	881 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	ILS1	P09436	1072 aa	Known RBP	2.7	□□□□□ -1.98
VTI1	YMR197C	CBP3	P21560	335 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	CWH43	P25618	953 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	PWP2	P25635	923 aa	Known RBP	2.7	□□□□□ -1.98
VTI1	YMR197C	DPB3	P27344	201 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	PAF1	P38351	445 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	SRP68	P38687	599 aa	Known RBP	2.7	□□□□□ -1.98
VTI1	YMR197C	CIR1	P42940	261 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	YNR029C	P53729	429 aa	Known RBP	2.7	□□□□□ -1.98
VTI1	YMR197C	FOL1	P53848	824 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	YNL058C	P53947	316 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	BOP3	P53958	396 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	TMA64	Q04600	565 aa	Known RBP	2.7	□□□□□ -1.98
VTI1	YMR197C	YOR389W	Q08912	624 aa		2.7	□□□□□ -1.98
VTI1	YMR197C	AMD2	P22580	549 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	RRP43	P25359	394 aa	Predicted RBP	2.69	□□□□□ -1.98
VTI1	YMR197C	DAL3	P32459	195 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	VPS24	P36095	224 aa	Known RBP	2.69	□□□□□ -1.98
VTI1	YMR197C	SCO2	P38072	301 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	PEA2	P40091	420 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	MDG1	P53885	366 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	UBP16	Q02863	499 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	PFA4	Q12006	378 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	FAP7	Q12055	197 aa	Predicted RBP	2.69	□□□□□ -1.98
VTI1	YMR197C	ATX2	Q12067	313 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	YPR027C	Q12079	277 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	VPS5	Q92331	675 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	YOR111W	Q99210	232 aa		2.69	□□□□□ -1.98
VTI1	YMR197C	CHO2	P05374	869 aa	Known RBP	2.68	□□□□□ -1.98
VTI1	YMR197C	ARG1	P22768	420 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	TRX2	P22803	104 aa	Known RBP	2.68	□□□□□ -1.98
VTI1	YMR197C	PLC1	P32383	869 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	RRP8	P38961	392 aa	Known RBP	2.68	□□□□□ -1.98
VTI1	YMR197C	ERP2	P39704	215 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	LAS21	P40367	830 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	YIL152W	P40455	235 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	IRC5	P43610	853 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	COS12	P53053	380 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	DSE3	Q08729	430 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	GET3	Q12154	354 aa	Known RBP	2.68	□□□□□ -1.98
VTI1	YMR197C	LCB4	Q12246	624 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	Q0010	Q9ZZX9	128 aa		2.68	□□□□□ -1.98
VTI1	YMR197C	YCR043C	P25361	127 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	KES1	P35844	434 aa	Known RBP	2.67	□□□□□ -1.98
VTI1	YMR197C	FUI1	P38196	639 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	STB5	P38699	743 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	SAP1	P39955	897 aa	Known RBP	2.67	□□□□□ -1.98
VTI1	YMR197C	MAM1	P40065	302 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	YGR237C	P50089	785 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	MNT2	P53059	558 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	PEX8	P53248	589 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	AAT1	Q01802	451 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	VTC3	Q02725	835 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	PLM2	Q04383	521 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	RAD34	Q06665	692 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	YOR378W	Q08902	515 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	SLX4	Q12098	748 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	LYS21	Q12122	440 aa	Known RBP	2.67	□□□□□ -1.98
VTI1	YMR197C	UBX3	Q12229	455 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	NYV1	Q12255	253 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	NKP1	Q12493	238 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	TMA17	Q12513	150 aa		2.67	□□□□□ -1.98
VTI1	YMR197C	TMA7	Q3E764	64 aa	Known RBP	2.67	□□□□□ -1.98
VTI1	YMR197C	ARC40	P38328	384 aa	Known RBP	2.66	□□□□□ -1.98
VTI1	YMR197C	TOM71	P38825	639 aa	Known RBP	2.66	□□□□□ -1.98
VTI1	YMR197C	VPS8	P39702	1274 aa		2.66	□□□□□ -1.98
VTI1	YMR197C	RAD26	P40352	1085 aa		2.66	□□□□□ -1.98
VTI1	YMR197C	SKY1	Q03656	742 aa		2.66	□□□□□ -1.98
VTI1	YMR197C	ATG16	Q03818	150 aa		2.66	□□□□□ -1.98
VTI1	YMR197C	YML053C	Q04978	212 aa		2.66	□□□□□ -1.98
VTI1	YMR197C	YMR034C	Q05131	434 aa	Predicted RBP	2.66	□□□□□ -1.98
VTI1	YMR197C	BRE1	Q07457	700 aa	Known RBP	2.66	□□□□□ -1.98
VTI1	YMR197C	URA3	P03962	267 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	ATP4	P05626	244 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	SEC18	P18759	758 aa	Known RBP	2.65	□□□□□ -1.99
VTI1	YMR197C	LNP1	P38878	278 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	ERV46	P39727	415 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	NOC2	P39744	710 aa	Known RBP	2.65	□□□□□ -1.99
VTI1	YMR197C	VPS27	P40343	622 aa	Known RBP	2.65	□□□□□ -1.99
VTI1	YMR197C	TES1	P41903	349 aa	Known RBP	2.65	□□□□□ -1.99
VTI1	YMR197C	YPT11	P48559	417 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	ARA2	Q04212	335 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	COG4	Q06096	861 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	YTH1	Q06102	208 aa	Predicted RBP	2.65	□□□□□ -1.99
VTI1	YMR197C	GRS2	Q06817	618 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	YDL242W	Q07746	117 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	MLH2	Q07980	695 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	CWC2	Q12046	339 aa	Predicted RBP	2.65	□□□□□ -1.99
VTI1	YMR197C	HOS1	Q12214	470 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	RMP1	Q12530	201 aa		2.65	□□□□□ -1.99
VTI1	YMR197C	NOP1	P15646	327 aa	Known RBP	2.64	□□□□□ -1.99
VTI1	YMR197C	YEF3	P16521	1044 aa	Known RBP	2.64	□□□□□ -1.99
VTI1	YMR197C	MFT1	P33441	392 aa	Known RBP	2.64	□□□□□ -1.99
VTI1	YMR197C	MPE1	P35728	441 aa	Known RBP	2.64	□□□□□ -1.99
VTI1	YMR197C	ARO9	P38840	513 aa	Predicted RBP	2.64	□□□□□ -1.99
VTI1	YMR197C	EAF5	P39995	279 aa		2.64	□□□□□ -1.99
VTI1	YMR197C	YJR120W	P47157	116 aa		2.64	□□□□□ -1.99
VTI1	YMR197C	SND1	Q04007	877 aa		2.64	□□□□□ -1.99
VTI1	YMR197C	NRT1	Q08485	598 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms