RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A GSH2Q08220 491 aa1.94□□□□□ -2.1
YMR172C-AYMR172C-A RPS21AP0C0V8 87 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A RPL42AP0CX27 106 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A RPL42BP0CX28 106 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A PLC1P32383 869 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A TYS1P36421 394 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A RKM3P38222 552 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A NOP2P40991 618 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A GZF3P42944 551 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A VPS25P47142 202 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A ORC5P50874 479 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A YNL092WP53934 400 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A BET4Q00618 327 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A YLR281CQ05863 155 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A HFI1Q12060 488 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A LYS21Q12122 440 aaKnown RBP1.93□□□□□ -2.1
YMR172C-AYMR172C-A APM4Q99186 491 aa1.93□□□□□ -2.1
YMR172C-AYMR172C-A CHO2P05374 869 aaKnown RBP1.92□□□□□ -2.1
YMR172C-AYMR172C-A ILV2P07342 687 aaKnown RBP1.92□□□□□ -2.1
YMR172C-AYMR172C-A HXT4P32467 576 aa1.92□□□□□ -2.1
YMR172C-AYMR172C-A NIC96P34077 839 aa1.92□□□□□ -2.1
YMR172C-AYMR172C-A KES1P35844 434 aaKnown RBP1.92□□□□□ -2.1
YMR172C-AYMR172C-A RNR4P49723 345 aaKnown RBP1.92□□□□□ -2.1
YMR172C-AYMR172C-A FMP42Q04991 504 aa1.92□□□□□ -2.1
YMR172C-AYMR172C-A YMR230W-AQ3E7B5 62 aa1.92□□□□□ -2.1
YMR172C-AYMR172C-A PRP16P15938 1071 aaPredicted RBP1.91□□□□□ -2.1
YMR172C-AYMR172C-A RPL8AP17076 256 aaKnown RBP1.91□□□□□ -2.1
YMR172C-AYMR172C-A AMD2P22580 549 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A DID4P36108 232 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A SLX1P38324 304 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A OCA5P38738 679 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A BZZ1P38822 633 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A PEF1P53238 335 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A FPR4Q06205 392 aaPredicted RBP1.91□□□□□ -2.1
YMR172C-AYMR172C-A RAD34Q06665 692 aa1.91□□□□□ -2.1
YMR172C-AYMR172C-A NGL1Q08213 363 aaKnown RBP1.91□□□□□ -2.1
YMR172C-AYMR172C-A YTM1Q12024 460 aaPredicted RBP1.91□□□□□ -2.1
YMR172C-AYMR172C-A NOP14Q99207 810 aaKnown RBP1.91□□□□□ -2.1
YMR172C-AYMR172C-A STB5P38699 743 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A ERV46P39727 415 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A YJL107CP42947 387 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A MNN11P46985 422 aaKnown RBP1.9□□□□□ -2.11
YMR172C-AYMR172C-A FCP1Q03254 732 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A MTQ2Q03920 221 aaPredicted RBP1.9□□□□□ -2.11
YMR172C-AYMR172C-A THI73Q07904 523 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A GPN2Q08726 347 aaPredicted RBP1.9□□□□□ -2.11
YMR172C-AYMR172C-A LCB4Q12246 624 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A VPS5Q92331 675 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A ADR1P07248 1323 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A NUP145P49687 1317 aa1.9□□□□□ -2.11
YMR172C-AYMR172C-A CWH43P25618 953 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A IDS2P46958 469 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A CRZ1P53968 678 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A YAT1P80235 687 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A IZH1Q03419 316 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A ARA2Q04212 335 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A ECM16Q04217 1267 aaKnown RBP1.89□□□□□ -2.11
YMR172C-AYMR172C-A YDL242WQ07746 117 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A HOS1Q12214 470 aa1.89□□□□□ -2.11
YMR172C-AYMR172C-A YFL068WP0CX99 160 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A YLL066W-AP0CY00 160 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A YLL067W-AP0CY01 160 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A SAN1P22470 610 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A SIP1P32578 815 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A PPG1P32838 368 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A ARN1P38731 627 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A QRI7P43122 407 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A COS12P53053 380 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A SMA2Q04658 369 aa1.88□□□□□ -2.11
YMR172C-AYMR172C-A NOP56Q12460 504 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
YMR172C-AYMR172C-A ARG1P22768 420 aa1.87□□□□□ -2.11
YMR172C-AYMR172C-A MNN2P38069 597 aa1.87□□□□□ -2.11
YMR172C-AYMR172C-A SRP68P38687 599 aaKnown RBP1.87□□□□□ -2.11
YMR172C-AYMR172C-A YND1P40009 630 aa1.87□□□□□ -2.11
YMR172C-AYMR172C-A ACS1Q01574 713 aa1.87□□□□□ -2.11
YMR172C-AYMR172C-A FAP7Q12055 197 aaPredicted RBP1.87□□□□□ -2.11
YMR172C-AYMR172C-A YPR027CQ12079 277 aa1.87□□□□□ -2.11
YMR172C-AYMR172C-A TAH18Q12181 623 aa1.87□□□□□ -2.11
YMR172C-AYMR172C-A SES1P07284 462 aaKnown RBP1.86□□□□□ -2.11
YMR172C-AYMR172C-A ARO9P38840 513 aaPredicted RBP1.86□□□□□ -2.11
YMR172C-AYMR172C-A PCL6P40038 420 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A ROK1P45818 564 aaPredicted RBP1.86□□□□□ -2.11
YMR172C-AYMR172C-A YGL036WP53185 909 aaPredicted RBP1.86□□□□□ -2.11
YMR172C-AYMR172C-A UME1Q03010 460 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A PDR8Q06149 701 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A THI3Q07471 609 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A YPL191CQ08930 360 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A RSA1Q08932 381 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A YLR112WQ12130 139 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A Q0010Q9ZZX9 128 aa1.86□□□□□ -2.11
YMR172C-AYMR172C-A CYB2P00175 591 aa1.85□□□□□ -2.11
YMR172C-AYMR172C-A PTC6P25646 442 aa1.85□□□□□ -2.11
YMR172C-AYMR172C-A SWC3P31376 625 aa1.85□□□□□ -2.11
YMR172C-AYMR172C-A PRO3P32263 286 aaKnown RBP1.85□□□□□ -2.11
YMR172C-AYMR172C-A GSH1P32477 678 aa1.85□□□□□ -2.11
YMR172C-AYMR172C-A RPF2P36160 344 aaKnown RBP1.85□□□□□ -2.11
YMR172C-AYMR172C-A EXO84P38261 753 aa1.85□□□□□ -2.11
YMR172C-AYMR172C-A VBA2P38358 474 aaKnown RBP1.85□□□□□ -2.11
YMR172C-AYMR172C-A VPS8P39702 1274 aa1.85□□□□□ -2.11
YMR172C-AYMR172C-A PMT3P47190 753 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms