RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	GDB1	Q06625	1536 aa		3.76	□□□□□ -1.81
VPS33	YLR396C	YDL073W	Q07454	984 aa		3.76	□□□□□ -1.81
VPS33	YLR396C	TRM3	Q07527	1436 aa		3.76	□□□□□ -1.81
VPS33	YLR396C	NUP157	P40064	1391 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	RPP0	P05317	312 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	TPK2	P06245	380 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	MSH1	P25846	959 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	PRE2	P30656	287 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	LOT5	P34234	306 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	SDH8	P38345	138 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	PIH1	P38768	344 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	IES5	P40060	125 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	YIL166C	P40445	542 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	SAP4	P53036	818 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	YGL117W	P53133	265 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	CPR6	P53691	371 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	TGS1	Q12052	315 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-LR1	P0C2J3	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-F	P0CX63	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-GR2	P0CX64	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-C	P25384	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-DR2	Q03494	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY1B-DR1	Q03855	1755 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-DR3	Q07791	1770 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-OR1	Q12113	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-DR1	Q12472	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	TY2B-OR2	Q12501	1770 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	RPN13	O13563	156 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	STE12	P13574	688 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	SEC18	P18759	758 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	BET2	P20133	325 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	RPS7A	P26786	190 aa	Known RBP	3.75	□□□□□ -1.81
VPS33	YLR396C	ZPS1	Q12512	249 aa		3.75	□□□□□ -1.81
VPS33	YLR396C	LEU2	P04173	364 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	PHO81	P17442	1178 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	MCM3	P24279	971 aa	Known RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	PWP2	P25635	923 aa	Known RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	CDC5	P32562	705 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	PMC1	P38929	1173 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	IDS2	P46958	469 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	SMC3	P47037	1230 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	MRK1	P50873	501 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	COQ6	P53318	479 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	CPR8	P53728	308 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	VPS64	Q03944	604 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	AIM6	Q07716	390 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
VPS33	YLR396C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	CPA2	P03965	1118 aa	Known RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	POL3	P15436	1097 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	ADY2	P25613	283 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	SPC110	P32380	944 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	GIS1	Q03833	894 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	CIA1	Q05583	330 aa		3.74	□□□□□ -1.81
VPS33	YLR396C	IWR1	Q07532	353 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS33	YLR396C	TY2B-B	Q12491	1770 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	AAC1	P04710	309 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	CTT1	P06115	562 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	WHI2	P12611	486 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	YCR061W	P25639	631 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	FUI1	P38196	639 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	RIX1	P38883	763 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS33	YLR396C	PAC2	P39937	518 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	ARB1	P40024	610 aa	Known RBP	3.73	□□□□□ -1.81
VPS33	YLR396C	APM1	Q00776	475 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS33	YLR396C	ATG16	Q03818	150 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	ARG7	Q04728	441 aa		3.73	□□□□□ -1.81
VPS33	YLR396C	RNR3	P21672	869 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	MSM1	P22438	575 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	SAT4	P25333	603 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	UGP1	P32861	499 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	YNL092W	P53934	400 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	YDL144C	Q07589	356 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	ICL2	Q12031	575 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	LSP1	Q12230	341 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	ADE3	P07245	946 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	YPK1	P12688	680 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	PMA2	P19657	947 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	SUI2	P20459	304 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	SPO11	P23179	398 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	RIT1	P23796	513 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	SWI4	P25302	1093 aa	Known RBP	3.72	□□□□□ -1.81
VPS33	YLR396C	DBF20	P32328	564 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	YMC1	P32331	307 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	SWE1	P32944	819 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	PUG1	P40100	303 aa		3.72	□□□□□ -1.81
VPS33	YLR396C	DNF2	Q12675	1612 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	MIS1	P09440	975 aa	Known RBP	3.71	□□□□□ -1.82
VPS33	YLR396C	IMA1	P53051	589 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	ESF2	P53743	316 aa	Known RBP	3.71	□□□□□ -1.82
VPS33	YLR396C	VMS1	Q04311	632 aa	Known RBP	3.71	□□□□□ -1.82
VPS33	YLR396C	ULA1	Q12059	462 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	ARO1	P08566	1588 aa	Known RBP	3.71	□□□□□ -1.82
VPS33	YLR396C	SNT2	P53127	1403 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	RPL7A	P05737	244 aa	Known RBP	3.71	□□□□□ -1.82
VPS33	YLR396C	BIK1	P11709	440 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	RPA135	P22138	1203 aa	Known RBP	3.71	□□□□□ -1.82
VPS33	YLR396C	PTH2	P34222	208 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	YBR138C	P38277	524 aa		3.71	□□□□□ -1.82
VPS33	YLR396C	CAB2	P40506	365 aa		3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms