RNA–Protein interactions for RNA: YLR166C

SEC10, Transcript of Essential 100kDa subunit of the exocyst complex, yeast

Gene SEC10, Length 2,616 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC10	YLR166C	YJL049W	P47048	450 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	VPS25	P47142	202 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	ORC5	P50874	479 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	YML119W	Q03208	357 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	NSE5	Q03718	556 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	COG8	Q04632	607 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	YMR254C	Q04838	102 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	Q0010	Q9ZZX9	128 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	ERR1	P0CX10	437 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	ERR2	P0CX11	437 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	BET2	P20133	325 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	VPS33	P20795	691 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	PCL2	P25693	308 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	MTC7	P32633	139 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	ARN1	P38731	627 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	BFA1	P47113	574 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	ESBP6	P53918	673 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	NOP15	P53927	220 aa	Predicted RBP	0.63	□□□□□ -2.31
SEC10	YLR166C	PLM2	Q04383	521 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	ARP9	Q05123	467 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	YLR112W	Q12130	139 aa		0.63	□□□□□ -2.31
SEC10	YLR166C	PDA1	P16387	420 aa	Known RBP	0.62	□□□□□ -2.31
SEC10	YLR166C	BUD14	P27637	709 aa		0.62	□□□□□ -2.31
SEC10	YLR166C	SWI6	P09959	803 aa		0.62	□□□□□ -2.31
SEC10	YLR166C	AMD2	P22580	549 aa		0.62	□□□□□ -2.31
SEC10	YLR166C	SAP1	P39955	897 aa	Known RBP	0.62	□□□□□ -2.31
SEC10	YLR166C	IES1	P43579	692 aa		0.62	□□□□□ -2.31
SEC10	YLR166C	BOR1	P53838	576 aa		0.62	□□□□□ -2.31
SEC10	YLR166C	UBP16	Q02863	499 aa		0.62	□□□□□ -2.31
SEC10	YLR166C	CHO2	P05374	869 aa	Known RBP	0.61	□□□□□ -2.31
SEC10	YLR166C	DSS4	P32601	143 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
SEC10	YLR166C	SDH8	P38345	138 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	YHR033W	P38690	423 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	PPT2	Q12036	173 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	DAP1	Q12091	152 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	SFL1	P20134	766 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	RAD24	P32641	659 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	YJR061W	P40355	935 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	LAS21	P40367	830 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	YPI1	P43587	155 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	YGL036W	P53185	909 aa	Predicted RBP	0.61	□□□□□ -2.31
SEC10	YLR166C	LCB4	Q12246	624 aa		0.61	□□□□□ -2.31
SEC10	YLR166C	HMG2	P12684	1045 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	PLC1	P32383	869 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	PTH1	P38876	190 aa	Known RBP	0.6	□□□□□ -2.31
SEC10	YLR166C	VPS41	P38959	992 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	RBG2	P53295	368 aa	Known RBP	0.6	□□□□□ -2.31
SEC10	YLR166C	YLL056C	Q12177	298 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	BAR1	P12630	587 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	HXT1	P32465	570 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	RRP8	P38961	392 aa	Known RBP	0.6	□□□□□ -2.31
SEC10	YLR166C	VPS8	P39702	1274 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	MAM1	P40065	302 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	PRE5	P40302	234 aa	Known RBP	0.6	□□□□□ -2.31
SEC10	YLR166C	ATG27	P46989	271 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	YML053C	Q04978	212 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	ECI1	Q05871	280 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	DIN7	Q12086	430 aa		0.6	□□□□□ -2.31
SEC10	YLR166C	TUF1	P02992	437 aa	Known RBP	0.59	□□□□□ -2.31
SEC10	YLR166C	MSH1	P25846	959 aa		0.59	□□□□□ -2.31
SEC10	YLR166C	MSS51	P32335	436 aa		0.59	□□□□□ -2.31
SEC10	YLR166C	RIM2	P38127	377 aa		0.59	□□□□□ -2.31
SEC10	YLR166C	TPA1	P40032	644 aa	Known RBP	0.59	□□□□□ -2.31
SEC10	YLR166C	YAT1	P80235	687 aa		0.59	□□□□□ -2.31
SEC10	YLR166C	CAC2	Q04199	468 aa		0.59	□□□□□ -2.31
SEC10	YLR166C	SES1	P07284	462 aa	Known RBP	0.59	□□□□□ -2.32
SEC10	YLR166C	POS5	Q06892	414 aa		0.59	□□□□□ -2.32
SEC10	YLR166C	YDL242W	Q07746	117 aa		0.59	□□□□□ -2.32
SEC10	YLR166C	CHZ1	P40019	153 aa	Predicted RBP	0.58	□□□□□ -2.32
SEC10	YLR166C	IML2	P47031	731 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	MET13	P53128	600 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	EAF7	P53911	425 aa	Known RBP	0.58	□□□□□ -2.32
SEC10	YLR166C	MGR1	P25573	417 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	TRS65	P32893	560 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	OCT1	P35999	772 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	RMA1	P36001	430 aa	Known RBP	0.58	□□□□□ -2.32
SEC10	YLR166C	SRO77	P38163	1010 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	YGL242C	P53066	181 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	SMA1	Q02651	245 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	PDR8	Q06149	701 aa		0.58	□□□□□ -2.32
SEC10	YLR166C	SOD1	P00445	154 aa	Known RBP	0.57	□□□□□ -2.32
SEC10	YLR166C	CBP1	P07252	654 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	SEC12	P11655	471 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	CBP3	P21560	335 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	RPS2	P25443	254 aa	Known RBP	0.57	□□□□□ -2.32
SEC10	YLR166C	MF(ALPHA)2	P32435	120 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	RPN2	P32565	945 aa	Known RBP	0.57	□□□□□ -2.32
SEC10	YLR166C	CDC1	P40986	491 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	GUD1	Q07729	489 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	CDC26	P14724	124 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	TDA3	P38758	523 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	SMK1	P41808	388 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	RET2	P43621	546 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	IGO1	P53897	168 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	PIG1	Q06216	648 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	THI3	Q07471	609 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	CDC53	Q12018	815 aa	Known RBP	0.57	□□□□□ -2.32
SEC10	YLR166C	YDL012C	Q12489	107 aa		0.57	□□□□□ -2.32
SEC10	YLR166C	ILV2	P07342	687 aa	Known RBP	0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms