RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C TDA7P53882 636 aaPredicted RBP11.92□□□□□ -0.5
YKR040CYKR040C PEX13P80667 386 aa11.92□□□□□ -0.5
YKR040CYKR040C SMA1Q02651 245 aa11.92□□□□□ -0.5
YKR040CYKR040C PIR1Q03178 341 aa11.92□□□□□ -0.5
YKR040CYKR040C ENT5Q03769 411 aaKnown RBP11.92□□□□□ -0.5
YKR040CYKR040C AIM41Q12032 185 aa11.92□□□□□ -0.5
YKR040CYKR040C YLL056CQ12177 298 aa11.92□□□□□ -0.5
YKR040CYKR040C MSB2P32334 1306 aa11.91□□□□□ -0.5
YKR040CYKR040C RAD3P06839 778 aa11.91□□□□□ -0.5
YKR040CYKR040C MRPL8P22353 238 aa11.91□□□□□ -0.5
YKR040CYKR040C PAP1P29468 568 aaKnown RBP11.91□□□□□ -0.5
YKR040CYKR040C MRS6P32864 603 aaKnown RBP11.91□□□□□ -0.5
YKR040CYKR040C PXA2P34230 853 aa11.91□□□□□ -0.5
YKR040CYKR040C GIP1P38229 639 aa11.91□□□□□ -0.5
YKR040CYKR040C PIK1P39104 1066 aa11.91□□□□□ -0.5
YKR040CYKR040C RPC17P47076 161 aa11.91□□□□□ -0.5
YKR040CYKR040C HLJ1P48353 224 aa11.91□□□□□ -0.5
YKR040CYKR040C NUP84P52891 726 aa11.91□□□□□ -0.5
YKR040CYKR040C MTG1Q03151 367 aaPredicted RBP11.91□□□□□ -0.5
YKR040CYKR040C POB3Q04636 552 aaKnown RBP11.91□□□□□ -0.5
YKR040CYKR040C FAP7Q12055 197 aaPredicted RBP11.91□□□□□ -0.5
YKR040CYKR040C AI5_ALPHAQ9ZZX1 630 aa11.91□□□□□ -0.5
YKR040CYKR040C RAD5P32849 1169 aaPredicted RBP11.9□□□□□ -0.5
YKR040CYKR040C LIP5P32875 414 aa11.9□□□□□ -0.5
YKR040CYKR040C TCD2P36101 447 aaKnown RBP11.9□□□□□ -0.5
YKR040CYKR040C MAP2P38174 421 aaKnown RBP11.9□□□□□ -0.5
YKR040CYKR040C YHL041WP38730 149 aa11.9□□□□□ -0.5
YKR040CYKR040C SMF1P38925 575 aa11.9□□□□□ -0.5
YKR040CYKR040C GIP4P39732 760 aa11.9□□□□□ -0.5
YKR040CYKR040C YMR134WP40207 237 aa11.9□□□□□ -0.5
YKR040CYKR040C MND2P40577 368 aa11.9□□□□□ -0.5
YKR040CYKR040C CLU1Q03690 1277 aaKnown RBP11.9□□□□□ -0.5
YKR040CYKR040C HPF1Q05164 967 aa11.9□□□□□ -0.5
YKR040CYKR040C ECI1Q05871 280 aa11.9□□□□□ -0.5
YKR040CYKR040C NRT1Q08485 598 aa11.9□□□□□ -0.5
YKR040CYKR040C PGC1Q08959 321 aa11.9□□□□□ -0.5
YKR040CYKR040C MCM16Q12262 181 aa11.9□□□□□ -0.5
YKR040CYKR040C CAN1P04817 590 aa11.89□□□□□ -0.51
YKR040CYKR040C PYC2P32327 1180 aaKnown RBP11.89□□□□□ -0.51
YKR040CYKR040C NMA111P53920 997 aa11.89□□□□□ -0.51
YKR040CYKR040C YNL035CP53962 389 aaKnown RBP11.89□□□□□ -0.51
YKR040CYKR040C ORC3P54790 616 aa11.89□□□□□ -0.51
YKR040CYKR040C YMR187CQ03236 431 aa11.89□□□□□ -0.51
YKR040CYKR040C TDA9Q04545 1251 aa11.89□□□□□ -0.51
YKR040CYKR040C OCA6Q12454 224 aa11.89□□□□□ -0.51
YKR040CYKR040C COX5AP00424 153 aa11.88□□□□□ -0.51
YKR040CYKR040C SEC63P14906 663 aa11.88□□□□□ -0.51
YKR040CYKR040C CKB2P38930 258 aa11.88□□□□□ -0.51
YKR040CYKR040C REF2P42073 533 aaPredicted RBP11.88□□□□□ -0.51
YKR040CYKR040C RGD2P43556 714 aa11.88□□□□□ -0.51
YKR040CYKR040C NPY1P53164 384 aa11.88□□□□□ -0.51
YKR040CYKR040C RIM8P53179 542 aa11.88□□□□□ -0.51
YKR040CYKR040C PRM1P53835 661 aa11.88□□□□□ -0.51
YKR040CYKR040C ARP9Q05123 467 aa11.88□□□□□ -0.51
YKR040CYKR040C JIP5Q06214 492 aaPredicted RBP11.88□□□□□ -0.51
YKR040CYKR040C TGL4P36165 910 aa11.87□□□□□ -0.51
YKR040CYKR040C MMS21P38632 267 aa11.87□□□□□ -0.51
YKR040CYKR040C YAT2P40017 923 aa11.87□□□□□ -0.51
YKR040CYKR040C REG1Q00816 1014 aa11.87□□□□□ -0.51
YKR040CYKR040C TRE2Q08693 809 aa11.87□□□□□ -0.51
YKR040CYKR040C ECM2P38241 364 aaKnown RBP11.86□□□□□ -0.51
YKR040CYKR040C YBP1P38315 674 aa11.86□□□□□ -0.51
YKR040CYKR040C MSG5P38590 489 aa11.86□□□□□ -0.51
YKR040CYKR040C ELO3P40319 345 aa11.86□□□□□ -0.51
YKR040CYKR040C PAN6P40459 309 aa11.86□□□□□ -0.51
YKR040CYKR040C SER33P40510 469 aa11.86□□□□□ -0.51
YKR040CYKR040C TIM13P53299 105 aa11.86□□□□□ -0.51
YKR040CYKR040C IPI3P53877 555 aa11.86□□□□□ -0.51
YKR040CYKR040C URH1Q04179 340 aa11.86□□□□□ -0.51
YKR040CYKR040C YPR114WQ06107 315 aa11.86□□□□□ -0.51
YKR040CYKR040C CMS1Q07897 291 aaKnown RBP11.86□□□□□ -0.51
YKR040CYKR040C SFI1Q12369 946 aa11.86□□□□□ -0.51
YKR040CYKR040C SCH9P11792 824 aaKnown RBP11.85□□□□□ -0.51
YKR040CYKR040C AAT2P23542 418 aaKnown RBP11.85□□□□□ -0.51
YKR040CYKR040C MNE1P24720 663 aa11.85□□□□□ -0.51
YKR040CYKR040C PUF4P25339 888 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
YKR040CYKR040C CCR4P31384 837 aaKnown RBP11.85□□□□□ -0.51
YKR040CYKR040C RAD26P40352 1085 aa11.85□□□□□ -0.51
YKR040CYKR040C YJR061WP40355 935 aa11.85□□□□□ -0.51
YKR040CYKR040C MAD1P40957 749 aa11.85□□□□□ -0.51
YKR040CYKR040C YJR124CP47159 448 aa11.85□□□□□ -0.51
YKR040CYKR040C EMC4P53073 190 aa11.85□□□□□ -0.51
YKR040CYKR040C AQR1P53943 586 aa11.85□□□□□ -0.51
YKR040CYKR040C MSH6Q03834 1242 aa11.85□□□□□ -0.51
YKR040CYKR040C LDB18Q07887 179 aa11.85□□□□□ -0.51
YKR040CYKR040C AVL9Q12500 764 aa11.85□□□□□ -0.51
YKR040CYKR040C FMP27Q06179 2628 aa11.85□□□□□ -0.51
YKR040CYKR040C CDC24P11433 854 aaPredicted RBP11.84□□□□□ -0.51
YKR040CYKR040C GCD6P32501 712 aaKnown RBP11.84□□□□□ -0.51
YKR040CYKR040C UTR2P32623 467 aa11.84□□□□□ -0.51
YKR040CYKR040C PBP2P38151 413 aaKnown RBP RIP-Chip data11.84□□□□□ -0.51not detected
YKR040CYKR040C YHR078WP38799 552 aa11.84□□□□□ -0.51
YKR040CYKR040C PCF11P39081 626 aaPredicted RBP11.84□□□□□ -0.51
YKR040CYKR040C IST3P40565 148 aaPredicted RBP11.84□□□□□ -0.51
YKR040CYKR040C RPL34AP87262 121 aaPredicted RBP11.84□□□□□ -0.51
YKR040CYKR040C CDC14Q00684 551 aa11.84□□□□□ -0.51
YKR040CYKR040C RLI1Q03195 608 aaKnown RBP11.84□□□□□ -0.51
YKR040CYKR040C ESC2Q06340 456 aa11.84□□□□□ -0.51
YKR040CYKR040C LEU1P07264 779 aaKnown RBP11.83□□□□□ -0.52
YKR040CYKR040C DCW1P36091 449 aa11.83□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms