RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C NDE2Q07500 545 aa5.59□□□□□ -1.52
VPS1YKR001C APL4Q12028 832 aa5.59□□□□□ -1.52
VPS1YKR001C AEP3Q12089 606 aa5.59□□□□□ -1.52
VPS1YKR001C BBP1Q12365 385 aa5.59□□□□□ -1.52
VPS1YKR001C RVB2Q12464 471 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C ADE3P07245 946 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C SES1P07284 462 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C TRL1P09880 827 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C TYR1P20049 452 aa5.58□□□□□ -1.52
VPS1YKR001C RRP43P25359 394 aaPredicted RBP5.58□□□□□ -1.52
VPS1YKR001C ZIP1P31111 875 aa5.58□□□□□ -1.52
VPS1YKR001C PHO11P35842 467 aa5.58□□□□□ -1.52
VPS1YKR001C POL12P38121 705 aaPredicted RBP5.58□□□□□ -1.52
VPS1YKR001C SEA4P38164 1038 aa5.58□□□□□ -1.52
VPS1YKR001C ECM21P38167 1117 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C BMT2P38278 337 aa5.58□□□□□ -1.52
VPS1YKR001C PHO12P38693 467 aa5.58□□□□□ -1.52
VPS1YKR001C HXT6P39003 570 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C HXT7P39004 570 aa5.58□□□□□ -1.52
VPS1YKR001C MKT1P40850 830 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C MVP1P40959 511 aaKnown RBP5.58□□□□□ -1.52
VPS1YKR001C TAF4P50105 388 aa5.58□□□□□ -1.52
VPS1YKR001C RPA14P50106 137 aa5.58□□□□□ -1.52
VPS1YKR001C CGR1P53188 120 aa5.58□□□□□ -1.52
VPS1YKR001C TFB2Q02939 513 aa5.58□□□□□ -1.52
VPS1YKR001C SSL1Q04673 461 aaPredicted RBP5.58□□□□□ -1.52
VPS1YKR001C GRS2Q06817 618 aa5.58□□□□□ -1.52
VPS1YKR001C YEH2Q07950 538 aa5.58□□□□□ -1.52
VPS1YKR001C SCM3Q12334 223 aa5.58□□□□□ -1.52
VPS1YKR001C IES3Q12345 250 aa5.58□□□□□ -1.52
VPS1YKR001C CMC2Q3E7A4 109 aa5.58□□□□□ -1.52
VPS1YKR001C LAG2Q92325 660 aa5.58□□□□□ -1.52
VPS1YKR001C CIT1P00890 479 aa5.57□□□□□ -1.52
VPS1YKR001C PHO8P11491 566 aa5.57□□□□□ -1.52
VPS1YKR001C CYC8P14922 966 aa5.57□□□□□ -1.52
VPS1YKR001C TAL1P15019 335 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C MSD1P15179 658 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C RPL8AP17076 256 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C RDS2P19541 446 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C DBP3P20447 523 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C PTP1P25044 335 aa5.57□□□□□ -1.52
VPS1YKR001C RPL8BP29453 256 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C PRO3P32263 286 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C LOS1P33418 1100 aaPredicted RBP5.57□□□□□ -1.52
VPS1YKR001C YKL069WP36088 180 aa5.57□□□□□ -1.52
VPS1YKR001C CAF4P36130 643 aa5.57□□□□□ -1.52
VPS1YKR001C SDH8P38345 138 aa5.57□□□□□ -1.52
VPS1YKR001C TDA3P38758 523 aa5.57□□□□□ -1.52
VPS1YKR001C SHQ1P40486 507 aaPredicted RBP5.57□□□□□ -1.52
VPS1YKR001C MNN11P46985 422 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C YJL049WP47048 450 aa5.57□□□□□ -1.52
VPS1YKR001C STR2P47164 639 aa5.57□□□□□ -1.52
VPS1YKR001C PRP31P49704 494 aaPredicted RBP5.57□□□□□ -1.52
VPS1YKR001C FMS1P50264 508 aa5.57□□□□□ -1.52
VPS1YKR001C YGR054WP53235 642 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C TOF1P53840 1238 aa5.57□□□□□ -1.52
VPS1YKR001C SAM50P53969 484 aa5.57□□□□□ -1.52
VPS1YKR001C GTR1Q00582 310 aa5.57□□□□□ -1.52
VPS1YKR001C CIK1Q01649 594 aa5.57□□□□□ -1.52
VPS1YKR001C MFM1Q02783 413 aa5.57□□□□□ -1.52
VPS1YKR001C PKH3Q03306 898 aaPredicted RBP5.57□□□□□ -1.52
VPS1YKR001C MSC2Q03455 724 aa5.57□□□□□ -1.52
VPS1YKR001C YDR056CQ12025 205 aa5.57□□□□□ -1.52
VPS1YKR001C RPP2BP02400 110 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C BIK1P11709 440 aa5.57□□□□□ -1.52
VPS1YKR001C URA4P20051 364 aa5.57□□□□□ -1.52
VPS1YKR001C YCR016WP25617 290 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C CDC15P27636 974 aa5.57□□□□□ -1.52
VPS1YKR001C NAM9P27929 486 aa5.57□□□□□ -1.52
VPS1YKR001C ORC2P32833 620 aa5.57□□□□□ -1.52
VPS1YKR001C LIN1P38852 340 aaPredicted RBP5.57□□□□□ -1.52
VPS1YKR001C AIM9P40053 627 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C YIL161WP40449 235 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C GNP1P48813 663 aa5.57□□□□□ -1.52
VPS1YKR001C RPN14P53196 417 aa5.57□□□□□ -1.52
VPS1YKR001C YML131WQ03102 365 aa5.57□□□□□ -1.52
VPS1YKR001C HER2Q03557 464 aa5.57□□□□□ -1.52
VPS1YKR001C YML083CQ04526 418 aa5.57□□□□□ -1.52
VPS1YKR001C DXO1Q06349 442 aa5.57□□□□□ -1.52
VPS1YKR001C DIS3Q08162 1001 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C THP3Q12049 470 aaKnown RBP5.57□□□□□ -1.52
VPS1YKR001C FAP7Q12055 197 aaPredicted RBP5.57□□□□□ -1.52
VPS1YKR001C TMA17Q12513 150 aa5.57□□□□□ -1.52
VPS1YKR001C HIS4P00815 799 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C CHO2P05374 869 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C MET3P08536 511 aa5.56□□□□□ -1.52
VPS1YKR001C POL3P15436 1097 aa5.56□□□□□ -1.52
VPS1YKR001C THR1P17423 357 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C KIN3P22209 435 aa5.56□□□□□ -1.52
VPS1YKR001C MCM10P32354 571 aa5.56□□□□□ -1.52
VPS1YKR001C PRP19P32523 503 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C LSM12P38828 187 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C TVP23P38962 199 aa5.56□□□□□ -1.52
VPS1YKR001C YRB2P40517 327 aa5.56□□□□□ -1.52
VPS1YKR001C SPO74P45819 413 aa5.56□□□□□ -1.52
VPS1YKR001C DLD2P46681 530 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C YJR120WP47157 116 aa5.56□□□□□ -1.52
VPS1YKR001C YGR035CP53222 116 aa5.56□□□□□ -1.52
VPS1YKR001C RPS15Q01855 142 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C MET14Q02196 202 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms