RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	SEC62	P21825	274 aa		5.74	□□□□□ -1.49
RSC30	YHR056C	NAR1	P23503	491 aa	Known RBP	5.74	□□□□□ -1.49
RSC30	YHR056C	STN1	P38960	494 aa		5.74	□□□□□ -1.49
RSC30	YHR056C	SNZ3	P43545	298 aa		5.74	□□□□□ -1.49
RSC30	YHR056C	SNZ2	P53824	298 aa		5.74	□□□□□ -1.49
RSC30	YHR056C	PPH21	P23594	369 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	PHO84	P25297	587 aa	Known RBP	5.73	□□□□□ -1.49
RSC30	YHR056C	CDC11	P32458	415 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	ASK10	P48361	1146 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	MET16	P18408	261 aa	Predicted RBP	5.73	□□□□□ -1.49
RSC30	YHR056C	RIM101	P33400	625 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	SIP4	P46954	829 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	ROM1	P53046	1155 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	CCE1	Q03702	353 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	YMR160W	Q03823	816 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	VPS20	Q04272	221 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	ESC2	Q06340	456 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	ERF2	Q06551	359 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	TGL5	Q12043	749 aa		5.73	□□□□□ -1.49
RSC30	YHR056C	POL2	P21951	2222 aa	Known RBP	5.73	□□□□□ -1.49
RSC30	YHR056C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	RIP-Chip
RSC30	YHR056C	CDC33	P07260	213 aa	Known RBP	5.72	□□□□□ -1.49
RSC30	YHR056C	SEC23	P15303	768 aa	Known RBP	5.72	□□□□□ -1.49
RSC30	YHR056C	MRPL37	P36532	105 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	SWC4	P53201	476 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	DOS2	P54858	310 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	FMP45	Q07651	309 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	BIK1	P11709	440 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	GFA1	P14742	717 aa	Known RBP	5.72	□□□□□ -1.49
RSC30	YHR056C	ADY2	P25613	283 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	QNS1	P38795	714 aa	Known RBP	5.72	□□□□□ -1.49
RSC30	YHR056C	SMF1	P38925	575 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	CDA1	Q06702	301 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	YLR030W	Q07967	263 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	PLB3	Q08108	686 aa		5.72	□□□□□ -1.49
RSC30	YHR056C	TRM1	P15565	570 aa	Known RBP	5.71	□□□□□ -1.49
RSC30	YHR056C	AAT2	P23542	418 aa	Known RBP	5.71	□□□□□ -1.49
RSC30	YHR056C	SAC6	P32599	642 aa	Known RBP	5.71	□□□□□ -1.49
RSC30	YHR056C	SPR1	P32603	445 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	YEL075C	P39972	122 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	MNN11	P46985	422 aa	Known RBP	5.71	□□□□□ -1.49
RSC30	YHR056C	ASG7	P46993	209 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	YPT11	P48559	417 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	YGR283C	P53336	341 aa	Predicted RBP	5.71	□□□□□ -1.49
RSC30	YHR056C	YNL247W	P53852	767 aa	Known RBP	5.71	□□□□□ -1.49
RSC30	YHR056C	YOL073C	Q08232	322 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	YPL216W	Q08964	1102 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	YPL272C	Q08984	517 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	GPM3	Q12326	303 aa		5.71	□□□□□ -1.49
RSC30	YHR056C	SCH9	P11792	824 aa	Known RBP	5.71	□□□□□ -1.5
RSC30	YHR056C	HOG1	P32485	435 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	TCB2	P48231	1178 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	VHS1	Q03785	461 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	SIZ1	Q04195	904 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	CMS1	Q07897	291 aa	Known RBP	5.71	□□□□□ -1.5
RSC30	YHR056C	PMA2	P19657	947 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	SEC1	P30619	724 aa	Known RBP	5.71	□□□□□ -1.5
RSC30	YHR056C	MIA40	P36046	403 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	TDA3	P38758	523 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	LRP1	P38801	184 aa	Known RBP	5.71	□□□□□ -1.5
RSC30	YHR056C	IST3	P40565	148 aa	Predicted RBP	5.71	□□□□□ -1.5
RSC30	YHR056C	YAP7	Q08182	245 aa		5.71	□□□□□ -1.5
RSC30	YHR056C	PRP8	P33334	2413 aa	Known RBP	5.7	□□□□□ -1.5
RSC30	YHR056C	ELM1	P32801	640 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	HYR1	P40581	163 aa	Known RBP	5.7	□□□□□ -1.5
RSC30	YHR056C	AIP1	P46680	615 aa	Known RBP	5.7	□□□□□ -1.5
RSC30	YHR056C	PMT3	P47190	753 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	EMC4	P53073	190 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	RHO3	Q00245	231 aa	Known RBP	5.7	□□□□□ -1.5
RSC30	YHR056C	INA17	Q02888	182 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	ARA2	Q04212	335 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	ARG7	Q04728	441 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	GUP2	Q08929	609 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
RSC30	YHR056C	EMP46	Q12396	444 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	PDR1	P12383	1068 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	YDR262W	Q12331	272 aa		5.7	□□□□□ -1.5
RSC30	YHR056C	DDP1	Q99321	188 aa	Known RBP	5.7	□□□□□ -1.5
RSC30	YHR056C	YBR056W-A	I2HB52	66 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	EMC1	P25574	760 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	SPT16	P32558	1035 aa	Known RBP	5.69	□□□□□ -1.5
RSC30	YHR056C	IML3	P38265	245 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	ERP2	P39704	215 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	STP3	Q05937	343 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	ETT1	Q08421	412 aa	Known RBP	5.69	□□□□□ -1.5
RSC30	YHR056C	THI21	Q08975	551 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	FRT1	Q99332	602 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	IRA1	P18963	3092 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	APA1	P16550	321 aa	Known RBP	5.69	□□□□□ -1.5
RSC30	YHR056C	UBA1	P22515	1024 aa	Known RBP	5.69	□□□□□ -1.5
RSC30	YHR056C	ARA1	P38115	344 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	SWC5	P38326	303 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	TIM17	P39515	158 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	NBP35	P52920	328 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	NNF2	P53253	936 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	TMS1	Q12116	473 aa		5.69	□□□□□ -1.5
RSC30	YHR056C	YPR089W	O13585	888 aa		5.68	□□□□□ -1.5
RSC30	YHR056C	HO	P09932	586 aa		5.68	□□□□□ -1.5
RSC30	YHR056C	SPC110	P32380	944 aa		5.68	□□□□□ -1.5
RSC30	YHR056C	CDC13	P32797	924 aa	Known RBP	5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms