RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W ARR3Q06598 404 aa2.45□□□□□ -2.02
SMD1YGR074W YDL073WQ07454 984 aa2.45□□□□□ -2.02
SMD1YGR074W AIM6Q07716 390 aa2.45□□□□□ -2.02
SMD1YGR074W NBP2Q12163 236 aa2.45□□□□□ -2.02
SMD1YGR074W PET122P10355 254 aa2.44□□□□□ -2.02
SMD1YGR074W NCP1P16603 691 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W UBC1P21734 215 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W PRP45P28004 379 aaPredicted RBP2.44□□□□□ -2.02
SMD1YGR074W MCM10P32354 571 aa2.44□□□□□ -2.02
SMD1YGR074W ARP2P32381 391 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W MRPL7P36519 292 aa2.44□□□□□ -2.02
SMD1YGR074W YIL161WP40449 235 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W MNT3P40549 630 aa2.44□□□□□ -2.02
SMD1YGR074W COS12P53053 380 aa2.44□□□□□ -2.02
SMD1YGR074W YIP4P53093 235 aa2.44□□□□□ -2.02
SMD1YGR074W ARC35P53731 342 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W CBK1P53894 756 aa2.44□□□□□ -2.02
SMD1YGR074W SMX3P54999 86 aaPredicted RBP2.44□□□□□ -2.02
SMD1YGR074W AAT1Q01802 451 aa2.44□□□□□ -2.02
SMD1YGR074W CRF1Q04930 467 aa2.44□□□□□ -2.02
SMD1YGR074W COG4Q06096 861 aa2.44□□□□□ -2.02
SMD1YGR074W BMS1Q08965 1183 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W RKI1Q12189 258 aa2.44□□□□□ -2.02
SMD1YGR074W COX17Q12287 69 aa2.44□□□□□ -2.02
SMD1YGR074W MDM20Q12387 796 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W RVB2Q12464 471 aaKnown RBP2.44□□□□□ -2.02
SMD1YGR074W LAM4P38800 1345 aa2.43□□□□□ -2.02
SMD1YGR074W YLR302CO13544 120 aa2.43□□□□□ -2.02
SMD1YGR074W SPO16P17122 198 aa2.43□□□□□ -2.02
SMD1YGR074W PDE1P22434 369 aa2.43□□□□□ -2.02
SMD1YGR074W SWI4P25302 1093 aaKnown RBP2.43□□□□□ -2.02
SMD1YGR074W PRE2P30656 287 aaKnown RBP2.43□□□□□ -2.02
SMD1YGR074W MSS1P32559 526 aaPredicted RBP2.43□□□□□ -2.02
SMD1YGR074W SIP1P32578 815 aa2.43□□□□□ -2.02
SMD1YGR074W SET3P36124 751 aa2.43□□□□□ -2.02
SMD1YGR074W FLO10P36170 1169 aa2.43□□□□□ -2.02
SMD1YGR074W BDH2P39713 417 aa2.43□□□□□ -2.02
SMD1YGR074W FUN12P39730 1002 aaKnown RBP2.43□□□□□ -2.02
SMD1YGR074W RIC1P40395 1056 aa2.43□□□□□ -2.02
SMD1YGR074W IST3P40565 148 aaPredicted RBP2.43□□□□□ -2.02
SMD1YGR074W BST1P43571 1029 aa2.43□□□□□ -2.02
SMD1YGR074W BUD17P53727 317 aa2.43□□□□□ -2.02
SMD1YGR074W MTG1Q03151 367 aaPredicted RBP2.43□□□□□ -2.02
SMD1YGR074W TRS23Q03784 219 aa2.43□□□□□ -2.02
SMD1YGR074W CIA1Q05583 330 aa2.43□□□□□ -2.02
SMD1YGR074W VID22Q05934 901 aa2.43□□□□□ -2.02
SMD1YGR074W RGC1Q06108 1083 aaKnown RBP2.43□□□□□ -2.02
SMD1YGR074W CRT10Q08226 957 aa2.43□□□□□ -2.02
SMD1YGR074W ICL2Q12031 575 aa2.43□□□□□ -2.02
SMD1YGR074W ERG27Q12452 347 aaKnown RBP2.43□□□□□ -2.02
SMD1YGR074W YER175W-AQ8TGU4 54 aa2.43□□□□□ -2.02
SMD1YGR074W ATP2P00830 511 aaKnown RBP2.42□□□□□ -2.02
SMD1YGR074W INH1P01097 85 aa2.42□□□□□ -2.02
SMD1YGR074W SNF1P06782 633 aaKnown RBP2.42□□□□□ -2.02
SMD1YGR074W SPO11P23179 398 aa2.42□□□□□ -2.02
SMD1YGR074W PRE8P23639 250 aa2.42□□□□□ -2.02
SMD1YGR074W YCR061WP25639 631 aa2.42□□□□□ -2.02
SMD1YGR074W CNE1P27825 502 aa2.42□□□□□ -2.02
SMD1YGR074W MRPL9P31334 269 aa2.42□□□□□ -2.02
SMD1YGR074W FRD1P32614 470 aaKnown RBP2.42□□□□□ -2.02
SMD1YGR074W JNM1P36224 373 aa2.42□□□□□ -2.02
SMD1YGR074W SDH8P38345 138 aa2.42□□□□□ -2.02
SMD1YGR074W MTG2P38860 518 aa2.42□□□□□ -2.02
SMD1YGR074W YJL206CP39529 758 aa2.42□□□□□ -2.02
SMD1YGR074W NOC2P39744 710 aaKnown RBP2.42□□□□□ -2.02
SMD1YGR074W YER010CP40011 234 aa2.42□□□□□ -2.02
SMD1YGR074W ARB1P40024 610 aaKnown RBP2.42□□□□□ -2.02
SMD1YGR074W LAS21P40367 830 aa2.42□□□□□ -2.02
SMD1YGR074W UBX6P47049 396 aa2.42□□□□□ -2.02
SMD1YGR074W CTF18P49956 741 aa2.42□□□□□ -2.02
SMD1YGR074W ESF2P53743 316 aaKnown RBP2.42□□□□□ -2.02
SMD1YGR074W APM1Q00776 475 aaPredicted RBP2.42□□□□□ -2.02
SMD1YGR074W YDR179W-AQ03983 463 aa2.42□□□□□ -2.02
SMD1YGR074W SKM1Q12469 655 aa2.42□□□□□ -2.02
SMD1YGR074W ZPS1Q12512 249 aa2.42□□□□□ -2.02
SMD1YGR074W RPN13O13563 156 aa2.41□□□□□ -2.02
SMD1YGR074W BIK1P11709 440 aa2.41□□□□□ -2.02
SMD1YGR074W WHI2P12611 486 aa2.41□□□□□ -2.02
SMD1YGR074W YPK1P12688 680 aaKnown RBP2.41□□□□□ -2.02
SMD1YGR074W RPA135P22138 1203 aaKnown RBP2.41□□□□□ -2.02
SMD1YGR074W ADY2P25613 283 aa2.41□□□□□ -2.02
SMD1YGR074W CDC15P27636 974 aa2.41□□□□□ -2.02
SMD1YGR074W YBR138CP38277 524 aa2.41□□□□□ -2.02
SMD1YGR074W IFA38P38286 347 aa2.41□□□□□ -2.02
SMD1YGR074W MAM1P40065 302 aa2.41□□□□□ -2.02
SMD1YGR074W ASE1P50275 885 aa2.41□□□□□ -2.02
SMD1YGR074W COG1P53079 417 aa2.41□□□□□ -2.02
SMD1YGR074W COG2P53271 262 aa2.41□□□□□ -2.02
SMD1YGR074W BSC5P53755 489 aa2.41□□□□□ -2.02
SMD1YGR074W SVL3Q03088 825 aaKnown RBP2.41□□□□□ -2.02
SMD1YGR074W TSR2Q06672 205 aaKnown RBP2.41□□□□□ -2.02
SMD1YGR074W YDR056CQ12025 205 aa2.41□□□□□ -2.02
SMD1YGR074W NUS1Q12063 375 aa2.41□□□□□ -2.02
SMD1YGR074W PNO1Q99216 274 aaKnown RBP2.41□□□□□ -2.02
SMD1YGR074W AAC1P04710 309 aa2.4□□□□□ -2.03
SMD1YGR074W FUM1P08417 488 aaKnown RBP2.4□□□□□ -2.03
SMD1YGR074W GUK1P15454 187 aaKnown RBP2.4□□□□□ -2.03
SMD1YGR074W CDC5P32562 705 aa2.4□□□□□ -2.03
SMD1YGR074W MFT1P33441 392 aaKnown RBP2.4□□□□□ -2.03
SMD1YGR074W RPF2P36160 344 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms