RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SAT4	P25333	603 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	UGP1	P32861	499 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	CCL1	P37366	393 aa		2.44	□□□□□ -2.02
DOT6	YER088C	STB5	P38699	743 aa		2.44	□□□□□ -2.02
DOT6	YER088C	ATF1	P40353	525 aa		2.44	□□□□□ -2.02
DOT6	YER088C	THI6	P41835	540 aa		2.44	□□□□□ -2.02
DOT6	YER088C	POL31	P46957	487 aa		2.44	□□□□□ -2.02
DOT6	YER088C	PIP2	P52960	996 aa		2.44	□□□□□ -2.02
DOT6	YER088C	MET14	Q02196	202 aa		2.44	□□□□□ -2.02
DOT6	YER088C	HOF1	Q05080	669 aa		2.44	□□□□□ -2.02
DOT6	YER088C	BRE1	Q07457	700 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	ZPS1	Q12512	249 aa		2.44	□□□□□ -2.02
DOT6	YER088C	VMR1	P38735	1592 aa		2.44	□□□□□ -2.02
DOT6	YER088C	VAS1	P07806	1104 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	MSS18	P08593	268 aa		2.44	□□□□□ -2.02
DOT6	YER088C	CBP3	P21560	335 aa		2.44	□□□□□ -2.02
DOT6	YER088C	AAD3	P25612	363 aa		2.44	□□□□□ -2.02
DOT6	YER088C	CDC5	P32562	705 aa		2.44	□□□□□ -2.02
DOT6	YER088C	CUE2	P36075	443 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	YLF2	P38746	405 aa		2.44	□□□□□ -2.02
DOT6	YER088C	ASK10	P48361	1146 aa		2.44	□□□□□ -2.02
DOT6	YER088C	COQ6	P53318	479 aa		2.44	□□□□□ -2.02
DOT6	YER088C	MOT3	P54785	490 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	EIS1	Q05050	843 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	ENT2	Q05785	613 aa		2.44	□□□□□ -2.02
DOT6	YER088C	OSW1	Q08692	278 aa		2.44	□□□□□ -2.02
DOT6	YER088C	YPL216W	Q08964	1102 aa		2.44	□□□□□ -2.02
DOT6	YER088C	PCL8	Q08966	492 aa		2.44	□□□□□ -2.02
DOT6	YER088C	ULA1	Q12059	462 aa		2.44	□□□□□ -2.02
DOT6	YER088C	HOS1	Q12214	470 aa		2.44	□□□□□ -2.02
DOT6	YER088C	ARP7	Q12406	477 aa		2.44	□□□□□ -2.02
DOT6	YER088C	Q0010	Q9ZZX9	128 aa		2.44	□□□□□ -2.02
DOT6	YER088C	ATP4	P05626	244 aa		2.43	□□□□□ -2.02
DOT6	YER088C	RPL7A	P05737	244 aa	Known RBP	2.43	□□□□□ -2.02
DOT6	YER088C	RNR3	P21672	869 aa	Known RBP	2.43	□□□□□ -2.02
DOT6	YER088C	VPS34	P22543	875 aa		2.43	□□□□□ -2.02
DOT6	YER088C	SPO11	P23179	398 aa		2.43	□□□□□ -2.02
DOT6	YER088C	FRD1	P32614	470 aa	Known RBP	2.43	□□□□□ -2.02
DOT6	YER088C	GRX7	P38068	203 aa		2.43	□□□□□ -2.02
DOT6	YER088C	SDH8	P38345	138 aa		2.43	□□□□□ -2.02
DOT6	YER088C	QRI7	P43122	407 aa		2.43	□□□□□ -2.02
DOT6	YER088C	MDR1	P53258	950 aa		2.43	□□□□□ -2.02
DOT6	YER088C	ACS1	Q01574	713 aa		2.43	□□□□□ -2.02
DOT6	YER088C	YDL073W	Q07454	984 aa		2.43	□□□□□ -2.02
DOT6	YER088C	RPL7B	Q12213	244 aa	Known RBP	2.43	□□□□□ -2.02
DOT6	YER088C	YOL114C	Q12322	202 aa		2.43	□□□□□ -2.02
DOT6	YER088C	AAC1	P04710	309 aa		2.42	□□□□□ -2.02
DOT6	YER088C	PIF1	P07271	859 aa		2.42	□□□□□ -2.02
DOT6	YER088C	WHI2	P12611	486 aa		2.42	□□□□□ -2.02
DOT6	YER088C	PRE2	P30656	287 aa	Known RBP	2.42	□□□□□ -2.02
DOT6	YER088C	LOT5	P34234	306 aa		2.42	□□□□□ -2.02
DOT6	YER088C	YPT53	P36019	220 aa		2.42	□□□□□ -2.02
DOT6	YER088C	PIH1	P38768	344 aa		2.42	□□□□□ -2.02
DOT6	YER088C	VPS8	P39702	1274 aa		2.42	□□□□□ -2.02
DOT6	YER088C	EXO1	P39875	702 aa		2.42	□□□□□ -2.02
DOT6	YER088C	TDA10	P42938	290 aa		2.42	□□□□□ -2.02
DOT6	YER088C	YFL015C	P43578	164 aa		2.42	□□□□□ -2.02
DOT6	YER088C	IMO32	P53219	342 aa		2.42	□□□□□ -2.02
DOT6	YER088C	TRS31	Q03337	283 aa		2.42	□□□□□ -2.02
DOT6	YER088C	AAD4	Q07747	329 aa		2.42	□□□□□ -2.02
DOT6	YER088C	YOL057W	Q08225	711 aa		2.42	□□□□□ -2.02
DOT6	YER088C	ADE5,7	P07244	802 aa	Known RBP	2.42	□□□□□ -2.02
DOT6	YER088C	SEC12	P11655	471 aa		2.42	□□□□□ -2.02
DOT6	YER088C	RPA135	P22138	1203 aa	Known RBP	2.42	□□□□□ -2.02
DOT6	YER088C	AMD2	P22580	549 aa		2.42	□□□□□ -2.02
DOT6	YER088C	YJU2	P28320	278 aa	Predicted RBP	2.42	□□□□□ -2.02
DOT6	YER088C	SDS22	P36047	338 aa		2.42	□□□□□ -2.02
DOT6	YER088C	STT3	P39007	718 aa	Known RBP	2.42	□□□□□ -2.02
DOT6	YER088C	SAW1	P39735	261 aa		2.42	□□□□□ -2.02
DOT6	YER088C	ATG36	P46983	293 aa		2.42	□□□□□ -2.02
DOT6	YER088C	MAD3	P47074	515 aa		2.42	□□□□□ -2.02
DOT6	YER088C	COQ11	Q05892	277 aa		2.42	□□□□□ -2.02
DOT6	YER088C	MLC2	Q06580	163 aa		2.42	□□□□□ -2.02
DOT6	YER088C	TGS1	Q12052	315 aa		2.42	□□□□□ -2.02
DOT6	YER088C	YCR061W	P25639	631 aa		2.41	□□□□□ -2.02
DOT6	YER088C	PEX2	P32800	271 aa		2.41	□□□□□ -2.02
DOT6	YER088C	MRI1	Q06489	411 aa	Known RBP	2.41	□□□□□ -2.02
DOT6	YER088C	CRD1	Q07560	283 aa		2.41	□□□□□ -2.02
DOT6	YER088C	AIM6	Q07716	390 aa		2.41	□□□□□ -2.02
DOT6	YER088C	YPK1	P12688	680 aa	Known RBP	2.41	□□□□□ -2.02
DOT6	YER088C	MBR1	P23493	339 aa		2.41	□□□□□ -2.02
DOT6	YER088C	PTP2	P29461	750 aa		2.41	□□□□□ -2.02
DOT6	YER088C	TAF5	P38129	798 aa		2.41	□□□□□ -2.02
DOT6	YER088C	YHL041W	P38730	149 aa		2.41	□□□□□ -2.02
DOT6	YER088C	RIM4	P38741	713 aa		2.41	□□□□□ -2.02
DOT6	YER088C	ARO9	P38840	513 aa	Predicted RBP	2.41	□□□□□ -2.02
DOT6	YER088C	ARB1	P40024	610 aa	Known RBP	2.41	□□□□□ -2.02
DOT6	YER088C	VFA1	P40080	203 aa		2.41	□□□□□ -2.02
DOT6	YER088C	RPT2	P40327	437 aa	Known RBP	2.41	□□□□□ -2.02
DOT6	YER088C	HIS6	P40545	261 aa		2.41	□□□□□ -2.02
DOT6	YER088C	TEP1	P53916	434 aa		2.41	□□□□□ -2.02
DOT6	YER088C	YML119W	Q03208	357 aa		2.41	□□□□□ -2.02
DOT6	YER088C	RAD33	Q04231	177 aa		2.41	□□□□□ -2.02
DOT6	YER088C	YNL162W-A	Q3E7A8	72 aa		2.41	□□□□□ -2.02
DOT6	YER088C	AI5_ALPHA	Q9ZZX1	630 aa		2.41	□□□□□ -2.02
DOT6	YER088C	BCK1	Q01389	1478 aa		2.4	□□□□□ -2.03
DOT6	YER088C	SEC3	P33332	1336 aa	Known RBP	2.4	□□□□□ -2.03
DOT6	YER088C	AQY1	P0CD91	305 aa		2.4	□□□□□ -2.03
DOT6	YER088C	BET2	P20133	325 aa		2.4	□□□□□ -2.03
DOT6	YER088C	SIR1	P21691	654 aa		2.4	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms