RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W YTM1Q12024 460 aaPredicted RBP2.74□□□□□ -1.97
SDC1YDR469W RRP6Q12149 733 aaKnown RBP2.74□□□□□ -1.97
SDC1YDR469W BI2P03873 423 aa2.73□□□□□ -1.97
SDC1YDR469W PHO81P17442 1178 aa2.73□□□□□ -1.97
SDC1YDR469W HOP1P20050 605 aa2.73□□□□□ -1.97
SDC1YDR469W YJU2P28320 278 aaPredicted RBP2.73□□□□□ -1.97
SDC1YDR469W MCM10P32354 571 aa2.73□□□□□ -1.97
SDC1YDR469W RPT3P33298 428 aaKnown RBP2.73□□□□□ -1.97
SDC1YDR469W TFC3P34111 1160 aa2.73□□□□□ -1.97
SDC1YDR469W PCM1P38628 557 aaKnown RBP2.73□□□□□ -1.97
SDC1YDR469W SAP185P40856 1058 aa2.73□□□□□ -1.97
SDC1YDR469W TES1P41903 349 aaKnown RBP2.73□□□□□ -1.97
SDC1YDR469W ERR3P42222 437 aa2.73□□□□□ -1.97
SDC1YDR469W DUG1P43616 481 aaKnown RBP2.73□□□□□ -1.97
SDC1YDR469W NIT2P47016 307 aa2.73□□□□□ -1.97
SDC1YDR469W IML2P47031 731 aa2.73□□□□□ -1.97
SDC1YDR469W YGR153WP48238 217 aa2.73□□□□□ -1.97
SDC1YDR469W HIM1Q06674 414 aa2.73□□□□□ -1.97
SDC1YDR469W SSP2Q08646 371 aa2.73□□□□□ -1.97
SDC1YDR469W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
SDC1YDR469W RRI2Q12348 645 aa2.73□□□□□ -1.97
SDC1YDR469W SNU66Q12420 587 aaPredicted RBP2.73□□□□□ -1.97
SDC1YDR469W YOL087CQ99247 1116 aa2.73□□□□□ -1.97
SDC1YDR469W CHS3P29465 1165 aa2.72□□□□□ -1.97
SDC1YDR469W PRE4P30657 266 aa2.72□□□□□ -1.97
SDC1YDR469W TOA1P32773 286 aa2.72□□□□□ -1.97
SDC1YDR469W DHR2P36009 735 aaPredicted RBP2.72□□□□□ -1.97
SDC1YDR469W CDS1P38221 457 aa2.72□□□□□ -1.97
SDC1YDR469W ARC40P38328 384 aaKnown RBP2.72□□□□□ -1.97
SDC1YDR469W MET30P39014 640 aa2.72□□□□□ -1.97
SDC1YDR469W GPP2P40106 250 aaKnown RBP2.72□□□□□ -1.97
SDC1YDR469W YMR018WQ04364 514 aa2.72□□□□□ -1.97
SDC1YDR469W ECM38Q05902 660 aaPredicted RBP2.72□□□□□ -1.97
SDC1YDR469W STP4Q07351 490 aa2.72□□□□□ -1.97
SDC1YDR469W PSR2Q07949 397 aa2.72□□□□□ -1.97
SDC1YDR469W UBX3Q12229 455 aa2.72□□□□□ -1.97
SDC1YDR469W HIF1Q12373 385 aa2.72□□□□□ -1.97
SDC1YDR469W SEC18P18759 758 aaKnown RBP2.71□□□□□ -1.98
SDC1YDR469W COX11P19516 300 aaKnown RBP2.71□□□□□ -1.98
SDC1YDR469W OPI1P21957 404 aa2.71□□□□□ -1.98
SDC1YDR469W TDA3P38758 523 aa2.71□□□□□ -1.98
SDC1YDR469W TMA108P40462 946 aa2.71□□□□□ -1.98
SDC1YDR469W GZF3P42944 551 aaKnown RBP2.71□□□□□ -1.98
SDC1YDR469W MNN11P46985 422 aaKnown RBP2.71□□□□□ -1.98
SDC1YDR469W GTR1Q00582 310 aa2.71□□□□□ -1.98
SDC1YDR469W YMR034CQ05131 434 aaPredicted RBP2.71□□□□□ -1.98
SDC1YDR469W TSR2Q06672 205 aaKnown RBP2.71□□□□□ -1.98
SDC1YDR469W DSE3Q08729 430 aa2.71□□□□□ -1.98
SDC1YDR469W YDR056CQ12025 205 aa2.71□□□□□ -1.98
SDC1YDR469W YPR027CQ12079 277 aa2.71□□□□□ -1.98
SDC1YDR469W AHA1Q12449 350 aaKnown RBP2.71□□□□□ -1.98
SDC1YDR469W GAL4P04386 881 aa2.7□□□□□ -1.98
SDC1YDR469W HSC82P15108 705 aaKnown RBP2.7□□□□□ -1.98
SDC1YDR469W CAP1P28495 268 aaKnown RBP2.7□□□□□ -1.98
SDC1YDR469W HEM12P32347 362 aaPredicted RBP2.7□□□□□ -1.98
SDC1YDR469W SWI3P32591 825 aa2.7□□□□□ -1.98
SDC1YDR469W FMP46P36141 133 aaKnown RBP2.7□□□□□ -1.98
SDC1YDR469W CCL1P37366 393 aa2.7□□□□□ -1.98
SDC1YDR469W ACA1P39970 489 aa2.7□□□□□ -1.98
SDC1YDR469W YEL025CP39991 1188 aa2.7□□□□□ -1.98
SDC1YDR469W BNA1P47096 177 aa2.7□□□□□ -1.98
SDC1YDR469W SLD3P53135 668 aa2.7□□□□□ -1.98
SDC1YDR469W ECM9Q02202 377 aa2.7□□□□□ -1.98
SDC1YDR469W YHM2Q04013 314 aa2.7□□□□□ -1.98
SDC1YDR469W PPN1Q04119 674 aa2.7□□□□□ -1.98
SDC1YDR469W COG8Q04632 607 aa2.7□□□□□ -1.98
SDC1YDR469W RTT103Q05543 409 aa2.7□□□□□ -1.98
SDC1YDR469W CYK3Q07533 885 aa2.7□□□□□ -1.98
SDC1YDR469W ATX2Q12067 313 aa2.7□□□□□ -1.98
SDC1YDR469W YMR230W-AQ3E7B5 62 aa2.7□□□□□ -1.98
SDC1YDR469W MSS18P08593 268 aa2.69□□□□□ -1.98
SDC1YDR469W RPS21AP0C0V8 87 aaKnown RBP2.69□□□□□ -1.98
SDC1YDR469W SER1P33330 395 aaKnown RBP2.69□□□□□ -1.98
SDC1YDR469W YBR139WP38109 508 aa2.69□□□□□ -1.98
SDC1YDR469W EHT1P38295 451 aa2.69□□□□□ -1.98
SDC1YDR469W RTT107P38850 1070 aa2.69□□□□□ -1.98
SDC1YDR469W RRP8P38961 392 aaKnown RBP2.69□□□□□ -1.98
SDC1YDR469W QRI7P43122 407 aa2.69□□□□□ -1.98
SDC1YDR469W PAP2P53632 584 aaKnown RBP2.69□□□□□ -1.98
SDC1YDR469W HLR1Q04429 423 aa2.69□□□□□ -1.98
SDC1YDR469W PEX15Q08215 383 aa2.69□□□□□ -1.98
SDC1YDR469W YOL114CQ12322 202 aa2.69□□□□□ -1.98
SDC1YDR469W SSM4P40318 1319 aa2.68□□□□□ -1.98
SDC1YDR469W HOM3P10869 527 aa2.68□□□□□ -1.98
SDC1YDR469W DID4P36108 232 aa2.68□□□□□ -1.98
SDC1YDR469W IMD2P38697 523 aaKnown RBP2.68□□□□□ -1.98
SDC1YDR469W ESL1P40456 1118 aa2.68□□□□□ -1.98
SDC1YDR469W VTC2P43585 828 aa2.68□□□□□ -1.98
SDC1YDR469W RET2P43621 546 aa2.68□□□□□ -1.98
SDC1YDR469W SRB7P47822 140 aa2.68□□□□□ -1.98
SDC1YDR469W IMD3P50095 523 aaKnown RBP2.68□□□□□ -1.98
SDC1YDR469W RSC1P53236 928 aa2.68□□□□□ -1.98
SDC1YDR469W MEP3P53390 489 aa2.68□□□□□ -1.98
SDC1YDR469W MOT3P54785 490 aaKnown RBP2.68□□□□□ -1.98
SDC1YDR469W PTA1Q01329 785 aaPredicted RBP2.68□□□□□ -1.98
SDC1YDR469W MEH1Q02205 184 aa2.68□□□□□ -1.98
SDC1YDR469W SKY1Q03656 742 aa2.68□□□□□ -1.98
SDC1YDR469W USA1Q03714 838 aa2.68□□□□□ -1.98
SDC1YDR469W SNU56Q03782 492 aaKnown RBP2.68□□□□□ -1.98
SDC1YDR469W SPC19Q03954 165 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 136.7 ms