RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C YHR054CP38780 354 aa2.76□□□□□ -1.97
SSN2YDR443C SNF12P53628 566 aa2.76□□□□□ -1.97
SSN2YDR443C DSE4P53753 1117 aa2.76□□□□□ -1.97
SSN2YDR443C RPN7Q06103 429 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C ECM7Q06200 448 aa2.76□□□□□ -1.97
SSN2YDR443C RPP2BP02400 110 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C CAR2P07991 424 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C PRB1P09232 635 aa2.76□□□□□ -1.97
SSN2YDR443C PRE8P23639 250 aa2.76□□□□□ -1.97
SSN2YDR443C PRP22P24384 1145 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C MRPL36P36531 177 aa2.76□□□□□ -1.97
SSN2YDR443C CUE3P53137 624 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C YNR040WP53736 256 aa2.76□□□□□ -1.97
SSN2YDR443C SNZ1Q03148 297 aa2.76□□□□□ -1.97
SSN2YDR443C GNT1Q12096 491 aa2.76□□□□□ -1.97
SSN2YDR443C RTK1Q12100 620 aaPredicted RBP2.76□□□□□ -1.97
SSN2YDR443C AFI1Q99222 893 aa2.76□□□□□ -1.97
SSN2YDR443C PET111P08468 800 aa2.76□□□□□ -1.97
SSN2YDR443C MDH1P17505 334 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
SSN2YDR443C CAP1P28495 268 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C YJL070CP40361 888 aa2.76□□□□□ -1.97
SSN2YDR443C MTD1Q02046 320 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C HRQ1Q05549 1077 aa2.76□□□□□ -1.97
SSN2YDR443C CTI6Q08923 506 aa2.76□□□□□ -1.97
SSN2YDR443C MOD5P07884 428 aa2.76□□□□□ -1.97
SSN2YDR443C GCD1P09032 578 aaPredicted RBP2.76□□□□□ -1.97
SSN2YDR443C CBS1P14066 229 aa2.76□□□□□ -1.97
SSN2YDR443C YKT6P36015 200 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C ETP1P38748 585 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C GPB2P39717 880 aa2.76□□□□□ -1.97
SSN2YDR443C YJL045WP47052 634 aa2.76□□□□□ -1.97
SSN2YDR443C TCB2P48231 1178 aa2.76□□□□□ -1.97
SSN2YDR443C ACS1Q01574 713 aa2.76□□□□□ -1.97
SSN2YDR443C EFR3Q03653 782 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C TFC6Q06339 672 aa2.76□□□□□ -1.97
SSN2YDR443C YOR059CQ08448 450 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C RTC5Q12108 567 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C MRPL23Q12487 163 aaPredicted RBP2.76□□□□□ -1.97
SSN2YDR443C DIF1O13577 133 aa2.75□□□□□ -1.97
SSN2YDR443C IMG2P25642 146 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C MRE11P32829 692 aa2.75□□□□□ -1.97
SSN2YDR443C YKR075CP36155 307 aa2.75□□□□□ -1.97
SSN2YDR443C KTR3P38130 404 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C SPT8P38915 602 aa2.75□□□□□ -1.97
SSN2YDR443C LYS9P38999 446 aa2.75□□□□□ -1.97
SSN2YDR443C YEL057CP39983 233 aa2.75□□□□□ -1.97
SSN2YDR443C MRX1P40050 688 aa2.75□□□□□ -1.97
SSN2YDR443C ASG1P40467 964 aa2.75□□□□□ -1.97
SSN2YDR443C PRM2P40534 656 aa2.75□□□□□ -1.97
SSN2YDR443C SMA1Q02651 245 aa2.75□□□□□ -1.97
SSN2YDR443C HMI1Q12039 706 aa2.75□□□□□ -1.97
SSN2YDR443C GLO4Q12320 285 aa2.75□□□□□ -1.97
SSN2YDR443C GIS3Q12418 502 aa2.75□□□□□ -1.97
SSN2YDR443C CTF3Q12748 733 aa2.75□□□□□ -1.97
SSN2YDR443C RPL11AP0C0W9 174 aaKnown RBP2.75□□□□□ -1.97
SSN2YDR443C MDL2P33311 773 aa2.75□□□□□ -1.97
SSN2YDR443C PHO11P35842 467 aa2.75□□□□□ -1.97
SSN2YDR443C MRPL40P36534 297 aa2.75□□□□□ -1.97
SSN2YDR443C PHO12P38693 467 aa2.75□□□□□ -1.97
SSN2YDR443C LRO1P40345 661 aa2.75□□□□□ -1.97
SSN2YDR443C YIL089WP40500 205 aa2.75□□□□□ -1.97
SSN2YDR443C SHE4P51534 789 aa2.75□□□□□ -1.97
SSN2YDR443C PAN2P53010 1115 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C YGL242CP53066 181 aa2.75□□□□□ -1.97
SSN2YDR443C RPN14P53196 417 aa2.75□□□□□ -1.97
SSN2YDR443C PRO2P54885 456 aaKnown RBP2.75□□□□□ -1.97
SSN2YDR443C YDR344CQ05510 147 aa2.75□□□□□ -1.97
SSN2YDR443C ARR2Q06597 130 aa2.75□□□□□ -1.97
SSN2YDR443C RPN5Q12250 445 aaKnown RBP2.75□□□□□ -1.97
SSN2YDR443C RPL11BQ3E757 174 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C UNG1P12887 359 aa2.75□□□□□ -1.97
SSN2YDR443C SPB1P25582 841 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C CDC12P32468 407 aaKnown RBP2.75□□□□□ -1.97
SSN2YDR443C GPT2P36148 743 aa2.75□□□□□ -1.97
SSN2YDR443C YBL029WP38201 376 aa2.75□□□□□ -1.97
SSN2YDR443C COS111P38308 924 aa2.75□□□□□ -1.97
SSN2YDR443C PNT1P38969 423 aa2.75□□□□□ -1.97
SSN2YDR443C RLP7P40693 322 aaKnown RBP2.75□□□□□ -1.97
SSN2YDR443C LSB6P42951 607 aa2.75□□□□□ -1.97
SSN2YDR443C JJJ2P46997 583 aa2.75□□□□□ -1.97
SSN2YDR443C MDR1P53258 950 aa2.75□□□□□ -1.97
SSN2YDR443C YNL050CP53952 270 aa2.75□□□□□ -1.97
SSN2YDR443C ORC4P54791 529 aa2.75□□□□□ -1.97
SSN2YDR443C MRPL1Q04599 285 aa2.75□□□□□ -1.97
SSN2YDR443C YPR196WQ06595 470 aa2.75□□□□□ -1.97
SSN2YDR443C LUC7Q07508 261 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C IWR1Q07532 353 aaPredicted RBP2.75□□□□□ -1.97
SSN2YDR443C RIM20Q12033 661 aa2.75□□□□□ -1.97
SSN2YDR443C CDC26P14724 124 aa2.74□□□□□ -1.97
SSN2YDR443C RRP43P25359 394 aaPredicted RBP2.74□□□□□ -1.97
SSN2YDR443C PDC6P26263 563 aaKnown RBP2.74□□□□□ -1.97
SSN2YDR443C RPC37P36121 282 aa2.74□□□□□ -1.97
SSN2YDR443C REG2P38232 338 aa2.74□□□□□ -1.97
SSN2YDR443C CEP3P40969 608 aa2.74□□□□□ -1.97
SSN2YDR443C RRP46P53256 223 aaPredicted RBP2.74□□□□□ -1.97
SSN2YDR443C ADE13Q05911 482 aaKnown RBP2.74□□□□□ -1.97
SSN2YDR443C VHS3Q08438 674 aa2.74□□□□□ -1.97
SSN2YDR443C TRE1Q08919 783 aa2.74□□□□□ -1.97
SSN2YDR443C TCO89Q08921 799 aa2.74□□□□□ -1.97
SSN2YDR443C LYS21Q12122 440 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms