RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W RRI1Q12468 440 aa1.25□□□□□ -2.21
BFR2YDR299W YGR161W-CQ3E744 92 aa1.25□□□□□ -2.21
BFR2YDR299W CBP3P21560 335 aa1.24□□□□□ -2.21
BFR2YDR299W HXT4P32467 576 aa1.24□□□□□ -2.21
BFR2YDR299W DED81P38707 554 aaKnown RBP1.24□□□□□ -2.21
BFR2YDR299W SAP1P39955 897 aaKnown RBP1.24□□□□□ -2.21
BFR2YDR299W MAM1P40065 302 aa1.24□□□□□ -2.21
BFR2YDR299W RNR4P49723 345 aaKnown RBP1.24□□□□□ -2.21
BFR2YDR299W PEF1P53238 335 aa1.24□□□□□ -2.21
BFR2YDR299W RNH70P53331 553 aa1.24□□□□□ -2.21
BFR2YDR299W DIG1Q03063 452 aaKnown RBP1.24□□□□□ -2.21
BFR2YDR299W MTQ2Q03920 221 aaPredicted RBP1.24□□□□□ -2.21
BFR2YDR299W YMR317WQ04893 1140 aa1.24□□□□□ -2.21
BFR2YDR299W RTT103Q05543 409 aa1.24□□□□□ -2.21
BFR2YDR299W THI73Q07904 523 aa1.24□□□□□ -2.21
BFR2YDR299W YTM1Q12024 460 aaPredicted RBP1.24□□□□□ -2.21
BFR2YDR299W LYS21Q12122 440 aaKnown RBP1.24□□□□□ -2.21
BFR2YDR299W TIP41Q12199 356 aa1.24□□□□□ -2.21
BFR2YDR299W YER175W-AQ8TGU4 54 aa1.24□□□□□ -2.21
BFR2YDR299W APM4Q99186 491 aa1.24□□□□□ -2.21
BFR2YDR299W NOP14Q99207 810 aaKnown RBP1.24□□□□□ -2.21
BFR2YDR299W ADR1P07248 1323 aa1.24□□□□□ -2.21
BFR2YDR299W CHO2P05374 869 aaKnown RBP1.23□□□□□ -2.21
BFR2YDR299W RPL42AP0CX27 106 aaKnown RBP1.23□□□□□ -2.21
BFR2YDR299W RPL42BP0CX28 106 aaKnown RBP1.23□□□□□ -2.21
BFR2YDR299W AMD2P22580 549 aa1.23□□□□□ -2.21
BFR2YDR299W CNA1P23287 553 aa1.23□□□□□ -2.21
BFR2YDR299W PPZ1P26570 692 aa1.23□□□□□ -2.21
BFR2YDR299W PLC1P32383 869 aa1.23□□□□□ -2.21
BFR2YDR299W YOX1P34161 385 aa1.23□□□□□ -2.21
BFR2YDR299W DID4P36108 232 aa1.23□□□□□ -2.21
BFR2YDR299W YBR139WP38109 508 aa1.23□□□□□ -2.21
BFR2YDR299W ERV46P39727 415 aa1.23□□□□□ -2.21
BFR2YDR299W NOP2P40991 618 aaKnown RBP1.23□□□□□ -2.21
BFR2YDR299W MNN11P46985 422 aaKnown RBP1.23□□□□□ -2.21
BFR2YDR299W HOS2P53096 452 aaPredicted RBP1.23□□□□□ -2.21
BFR2YDR299W BET4Q00618 327 aa1.23□□□□□ -2.21
BFR2YDR299W RAD34Q06665 692 aa1.23□□□□□ -2.21
BFR2YDR299W NGL1Q08213 363 aaKnown RBP1.23□□□□□ -2.21
BFR2YDR299W NUP145P49687 1317 aa1.23□□□□□ -2.21
BFR2YDR299W ILV2P07342 687 aaKnown RBP1.22□□□□□ -2.21
BFR2YDR299W MSS51P32335 436 aa1.22□□□□□ -2.21
BFR2YDR299W KES1P35844 434 aaKnown RBP1.22□□□□□ -2.21
BFR2YDR299W STB5P38699 743 aa1.22□□□□□ -2.21
BFR2YDR299W DHH1P39517 506 aaKnown RBP1.22□□□□□ -2.21
BFR2YDR299W ORC5P50874 479 aa1.22□□□□□ -2.21
BFR2YDR299W GSH2Q08220 491 aa1.22□□□□□ -2.21
BFR2YDR299W LCB4Q12246 624 aa1.22□□□□□ -2.21
BFR2YDR299W YMR230W-AQ3E7B5 62 aa1.22□□□□□ -2.21
BFR2YDR299W VPS5Q92331 675 aa1.22□□□□□ -2.21
BFR2YDR299W ARG1P22768 420 aa1.22□□□□□ -2.21
BFR2YDR299W CWH43P25618 953 aa1.22□□□□□ -2.21
BFR2YDR299W NIC96P34077 839 aa1.22□□□□□ -2.21
BFR2YDR299W RKM3P38222 552 aa1.22□□□□□ -2.21
BFR2YDR299W SKP2P42843 763 aa1.22□□□□□ -2.21
BFR2YDR299W YJL107CP42947 387 aa1.22□□□□□ -2.21
BFR2YDR299W VPS25P47142 202 aa1.22□□□□□ -2.21
BFR2YDR299W UME1Q03010 460 aa1.22□□□□□ -2.21
BFR2YDR299W ARA2Q04212 335 aa1.22□□□□□ -2.21
BFR2YDR299W FMP42Q04991 504 aa1.22□□□□□ -2.21
BFR2YDR299W YLR281CQ05863 155 aa1.22□□□□□ -2.21
BFR2YDR299W YDL242WQ07746 117 aa1.22□□□□□ -2.21
BFR2YDR299W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
BFR2YDR299W YFL068WP0CX99 160 aa1.21□□□□□ -2.22
BFR2YDR299W YLL066W-AP0CY00 160 aa1.21□□□□□ -2.22
BFR2YDR299W YLL067W-AP0CY01 160 aa1.21□□□□□ -2.22
BFR2YDR299W MRC1P25588 1096 aa1.21□□□□□ -2.22
BFR2YDR299W SRP68P38687 599 aaKnown RBP1.21□□□□□ -2.22
BFR2YDR299W BZZ1P38822 633 aa1.21□□□□□ -2.22
BFR2YDR299W EMP65P40085 556 aa1.21□□□□□ -2.22
BFR2YDR299W IDS2P46958 469 aa1.21□□□□□ -2.22
BFR2YDR299W COS12P53053 380 aa1.21□□□□□ -2.22
BFR2YDR299W YAT1P80235 687 aa1.21□□□□□ -2.22
BFR2YDR299W ECM16Q04217 1267 aaKnown RBP1.21□□□□□ -2.22
BFR2YDR299W YPR027CQ12079 277 aa1.21□□□□□ -2.22
BFR2YDR299W HOS1Q12214 470 aa1.21□□□□□ -2.22
BFR2YDR299W Q0010Q9ZZX9 128 aa1.21□□□□□ -2.22
BFR2YDR299W SES1P07284 462 aaKnown RBP1.2□□□□□ -2.22
BFR2YDR299W ATP12P22135 325 aa1.2□□□□□ -2.22
BFR2YDR299W SIP1P32578 815 aa1.2□□□□□ -2.22
BFR2YDR299W SER1P33330 395 aaKnown RBP1.2□□□□□ -2.22
BFR2YDR299W PAF1P38351 445 aa1.2□□□□□ -2.22
BFR2YDR299W ARN1P38731 627 aa1.2□□□□□ -2.22
BFR2YDR299W ARO9P38840 513 aaPredicted RBP1.2□□□□□ -2.22
BFR2YDR299W VPS8P39702 1274 aa1.2□□□□□ -2.22
BFR2YDR299W SSP120P39931 234 aaKnown RBP1.2□□□□□ -2.22
BFR2YDR299W YND1P40009 630 aa1.2□□□□□ -2.22
BFR2YDR299W DUG1P43616 481 aaKnown RBP1.2□□□□□ -2.22
BFR2YDR299W MNT2P53059 558 aa1.2□□□□□ -2.22
BFR2YDR299W DNM1P54861 757 aa1.2□□□□□ -2.22
BFR2YDR299W ACS1Q01574 713 aa1.2□□□□□ -2.22
BFR2YDR299W IZH1Q03419 316 aa1.2□□□□□ -2.22
BFR2YDR299W TRE2Q08693 809 aa1.2□□□□□ -2.22
BFR2YDR299W GPN2Q08726 347 aaPredicted RBP1.2□□□□□ -2.22
BFR2YDR299W FAP7Q12055 197 aaPredicted RBP1.2□□□□□ -2.22
BFR2YDR299W URA3P03962 267 aa1.19□□□□□ -2.22
BFR2YDR299W PRP16P15938 1071 aaPredicted RBP1.19□□□□□ -2.22
BFR2YDR299W GSH1P32477 678 aa1.19□□□□□ -2.22
BFR2YDR299W MNN2P38069 597 aa1.19□□□□□ -2.22
BFR2YDR299W TAF5P38129 798 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms