RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C CBF2P32504 956 aa2.32□□□□□ -2.04
SSD1YDR293C MUD1P32605 298 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C SEC61P32915 480 aa2.32□□□□□ -2.04
SSD1YDR293C PIN4P34217 668 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SSD1YDR293C ASH1P34233 588 aa2.32□□□□□ -2.04
SSD1YDR293C YKL050CP35736 922 aa2.32□□□□□ -2.04
SSD1YDR293C SWC5P38326 303 aa2.32□□□□□ -2.04
SSD1YDR293C SSP120P39931 234 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C YMR134WP40207 237 aa2.32□□□□□ -2.04
SSD1YDR293C RPT2P40327 437 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C SEC9P40357 651 aa2.32□□□□□ -2.04
SSD1YDR293C DIM1P41819 318 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C GCD14P46959 383 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C ENT3P47160 408 aa2.32□□□□□ -2.04
SSD1YDR293C YML6P51998 286 aa2.32□□□□□ -2.04
SSD1YDR293C GPG1P53130 126 aa2.32□□□□□ -2.04
SSD1YDR293C YGR053CP53234 283 aa2.32□□□□□ -2.04
SSD1YDR293C IST1P53843 298 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C ELA1P53861 379 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C CCE1Q03702 353 aa2.32□□□□□ -2.04
SSD1YDR293C ARO80Q04052 950 aa2.32□□□□□ -2.04
SSD1YDR293C RRB1Q04225 511 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C YML082WQ04533 649 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C FAR8Q05040 523 aa2.32□□□□□ -2.04
SSD1YDR293C UTP4Q06679 776 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C IMA2Q08295 589 aa2.32□□□□□ -2.04
SSD1YDR293C ERP4Q12450 207 aa2.32□□□□□ -2.04
SSD1YDR293C GAL1P04385 528 aa2.31□□□□□ -2.04
SSD1YDR293C MOD5P07884 428 aa2.31□□□□□ -2.04
SSD1YDR293C RSR1P13856 272 aa2.31□□□□□ -2.04
SSD1YDR293C VMA2P16140 517 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C MSB1P21339 1137 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C VPS1P21576 704 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C DBF20P32328 564 aa2.31□□□□□ -2.04
SSD1YDR293C VPH1P32563 840 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C SMY2P32909 740 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C NIC96P34077 839 aa2.31□□□□□ -2.04
SSD1YDR293C POL12P38121 705 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C PCH2P38126 564 aa2.31□□□□□ -2.04
SSD1YDR293C RIM4P38741 713 aa2.31□□□□□ -2.04
SSD1YDR293C RIC1P40395 1056 aa2.31□□□□□ -2.04
SSD1YDR293C CNN1P43618 361 aa2.31□□□□□ -2.04
SSD1YDR293C PHO86P46956 311 aa2.31□□□□□ -2.04
SSD1YDR293C ALY2P47029 1046 aa2.31□□□□□ -2.04
SSD1YDR293C LIA1P47120 325 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C NMA2P53204 395 aa2.31□□□□□ -2.04
SSD1YDR293C VPS9P54787 451 aa2.31□□□□□ -2.04
SSD1YDR293C AVO1Q08236 1176 aa2.31□□□□□ -2.04
SSD1YDR293C AAD15Q08361 143 aa2.31□□□□□ -2.04
SSD1YDR293C NOT5Q12514 560 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C KSS1P14681 368 aa2.31□□□□□ -2.04
SSD1YDR293C SRV2P17555 526 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C AGP1P25376 633 aa2.31□□□□□ -2.04
SSD1YDR293C CHS3P29465 1165 aa2.31□□□□□ -2.04
SSD1YDR293C DEF1P35732 738 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C PHO88P38264 188 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C RRT2P38332 387 aa2.31□□□□□ -2.04
SSD1YDR293C OTU2P38747 307 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C END3P39013 349 aa2.31□□□□□ -2.04
SSD1YDR293C TDA10P42938 290 aa2.31□□□□□ -2.04
SSD1YDR293C RBL2P48606 106 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C MND1P53102 219 aa2.31□□□□□ -2.04
SSD1YDR293C RTT102P53330 157 aa2.31□□□□□ -2.04
SSD1YDR293C URH1Q04179 340 aa2.31□□□□□ -2.04
SSD1YDR293C MET7Q08645 548 aa2.31□□□□□ -2.04
SSD1YDR293C AI5_BETAQ9ZZX0 354 aa2.31□□□□□ -2.04
SSD1YDR293C AI3P03877 415 aa2.31□□□□□ -2.04
SSD1YDR293C ILS1P09436 1072 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C POL3P15436 1097 aa2.31□□□□□ -2.04
SSD1YDR293C PRP16P15938 1071 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C CLB4P24871 460 aa2.31□□□□□ -2.04
SSD1YDR293C CSM1P25651 190 aa2.31□□□□□ -2.04
SSD1YDR293C SLA1P32790 1244 aa2.31□□□□□ -2.04
SSD1YDR293C MAK5P38112 773 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C ALG3P38179 458 aa2.31□□□□□ -2.04
SSD1YDR293C FTH1P38310 465 aa2.31□□□□□ -2.04
SSD1YDR293C LCP5P40079 357 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C MMF1P40185 145 aaKnown RBP2.31□□□□□ -2.04
SSD1YDR293C AIM20P40451 204 aa2.31□□□□□ -2.04
SSD1YDR293C MNT3P40549 630 aa2.31□□□□□ -2.04
SSD1YDR293C SNZ3P43545 298 aa2.31□□□□□ -2.04
SSD1YDR293C LYS4P49367 693 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C TEL2P53038 688 aa2.31□□□□□ -2.04
SSD1YDR293C SNZ2P53824 298 aa2.31□□□□□ -2.04
SSD1YDR293C NOP15P53927 220 aaPredicted RBP2.31□□□□□ -2.04
SSD1YDR293C EFM6P53970 246 aa2.31□□□□□ -2.04
SSD1YDR293C SSL2Q00578 843 aa2.31□□□□□ -2.04
SSD1YDR293C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SSD1YDR293C SKY1Q03656 742 aa2.31□□□□□ -2.04
SSD1YDR293C YML037CQ03703 340 aa2.31□□□□□ -2.04
SSD1YDR293C ADY4Q05955 493 aa2.31□□□□□ -2.04
SSD1YDR293C YPQ2Q06328 317 aa2.31□□□□□ -2.04
SSD1YDR293C TPO1Q07824 586 aa2.31□□□□□ -2.04
SSD1YDR293C YLL056CQ12177 298 aa2.31□□□□□ -2.04
SSD1YDR293C IES3Q12345 250 aa2.31□□□□□ -2.04
SSD1YDR293C SPE4Q12455 300 aa2.31□□□□□ -2.04
SSD1YDR293C AVL9Q12500 764 aa2.31□□□□□ -2.04
SSD1YDR293C ATG11Q12527 1178 aa2.31□□□□□ -2.04
SSD1YDR293C MYO1P08964 1928 aa2.31□□□□□ -2.04
SSD1YDR293C ILV2P07342 687 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms