RNA–Protein interactions for RNA: YCR044C

PER1, Transcript of Protein of the endoplasmic reticulum, yeast

Gene PER1, Length 1,074 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PER1	YCR044C	MRP4	P32902	394 aa		4.55	□□□□□ -1.68
PER1	YCR044C	SHP1	P34223	423 aa		4.55	□□□□□ -1.68
PER1	YCR044C	TSA1	P34760	196 aa	Known RBP	4.55	□□□□□ -1.68
PER1	YCR044C	TGL4	P36165	910 aa		4.55	□□□□□ -1.68
PER1	YCR044C	ETR1	P38071	380 aa		4.55	□□□□□ -1.68
PER1	YCR044C	YMC2	P38087	329 aa		4.55	□□□□□ -1.68
PER1	YCR044C	SWC5	P38326	303 aa		4.55	□□□□□ -1.68
PER1	YCR044C	SAH1	P39954	449 aa	Known RBP	4.55	□□□□□ -1.68
PER1	YCR044C	EAF5	P39995	279 aa		4.55	□□□□□ -1.68
PER1	YCR044C	KHA1	P40309	873 aa		4.55	□□□□□ -1.68
PER1	YCR044C	ALG5	P40350	334 aa		4.55	□□□□□ -1.68
PER1	YCR044C	JEM1	P40358	645 aa		4.55	□□□□□ -1.68
PER1	YCR044C	PFK26	P40433	827 aa	Known RBP	4.55	□□□□□ -1.68
PER1	YCR044C	FET4	P40988	552 aa		4.55	□□□□□ -1.68
PER1	YCR044C	PAN2	P53010	1115 aa	Predicted RBP	4.55	□□□□□ -1.68
PER1	YCR044C	MIG2	P53035	382 aa		4.55	□□□□□ -1.68
PER1	YCR044C	RTA1	P53047	317 aa		4.55	□□□□□ -1.68
PER1	YCR044C	YGR125W	P53273	1036 aa		4.55	□□□□□ -1.68
PER1	YCR044C	LGE1	Q02796	332 aa	Known RBP	4.55	□□□□□ -1.68
PER1	YCR044C	YML020W	Q03722	664 aa		4.55	□□□□□ -1.68
PER1	YCR044C	CDA2	Q06703	312 aa		4.55	□□□□□ -1.68
PER1	YCR044C	IMA2	Q08295	589 aa		4.55	□□□□□ -1.68
PER1	YCR044C	SGT2	Q12118	346 aa	Known RBP	4.55	□□□□□ -1.68
PER1	YCR044C	ERP3	Q12403	225 aa		4.55	□□□□□ -1.68
PER1	YCR044C	OCA6	Q12454	224 aa		4.55	□□□□□ -1.68
PER1	YCR044C	SPE4	Q12455	300 aa		4.55	□□□□□ -1.68
PER1	YCR044C	NOT5	Q12514	560 aa	Predicted RBP	4.55	□□□□□ -1.68
PER1	YCR044C	PCD1	Q12524	340 aa		4.55	□□□□□ -1.68
PER1	YCR044C	SNA3	P14359	133 aa		4.54	□□□□□ -1.68
PER1	YCR044C	PUT4	P15380	627 aa		4.54	□□□□□ -1.68
PER1	YCR044C	VMA2	P16140	517 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	SLY1	P22213	666 aa		4.54	□□□□□ -1.68
PER1	YCR044C	PUP1	P25043	261 aa		4.54	□□□□□ -1.68
PER1	YCR044C	SPS22	P25380	463 aa		4.54	□□□□□ -1.68
PER1	YCR044C	RRT12	P25381	491 aa		4.54	□□□□□ -1.68
PER1	YCR044C	HEM3	P28789	327 aa		4.54	□□□□□ -1.68
PER1	YCR044C	MCM5	P29496	775 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	SEC1	P30619	724 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	MLS1	P30952	554 aa		4.54	□□□□□ -1.68
PER1	YCR044C	SEC6	P32844	805 aa		4.54	□□□□□ -1.68
PER1	YCR044C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
PER1	YCR044C	REG2	P38232	338 aa		4.54	□□□□□ -1.68
PER1	YCR044C	MMS4	P38257	691 aa		4.54	□□□□□ -1.68
PER1	YCR044C	QNS1	P38795	714 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	ERP2	P39704	215 aa		4.54	□□□□□ -1.68
PER1	YCR044C	FLC2	P39719	783 aa		4.54	□□□□□ -1.68
PER1	YCR044C	GIP4	P39732	760 aa		4.54	□□□□□ -1.68
PER1	YCR044C	SCC4	P40090	624 aa		4.54	□□□□□ -1.68
PER1	YCR044C	NEO1	P40527	1151 aa		4.54	□□□□□ -1.68
PER1	YCR044C	GVP36	P40531	326 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	RLP7	P40693	322 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	YJL107C	P42947	387 aa		4.54	□□□□□ -1.68
PER1	YCR044C	RCF2	P53721	224 aa		4.54	□□□□□ -1.68
PER1	YCR044C	UBX4	P54730	416 aa		4.54	□□□□□ -1.68
PER1	YCR044C	SPO19	Q03029	223 aa		4.54	□□□□□ -1.68
PER1	YCR044C	TRS130	Q03660	1102 aa		4.54	□□□□□ -1.68
PER1	YCR044C	HMO1	Q03973	246 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	ADE13	Q05911	482 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	YOR059C	Q08448	450 aa	Known RBP	4.54	□□□□□ -1.68
PER1	YCR044C	GAL10	P04397	699 aa		4.53	□□□□□ -1.68
PER1	YCR044C	YPK1	P12688	680 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	AAD3	P25612	363 aa		4.53	□□□□□ -1.68
PER1	YCR044C	RPL5	P26321	297 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	MEI4	P29467	408 aa		4.53	□□□□□ -1.68
PER1	YCR044C	PEX2	P32800	271 aa		4.53	□□□□□ -1.68
PER1	YCR044C	BCS1	P32839	456 aa		4.53	□□□□□ -1.68
PER1	YCR044C	WHI3	P34761	661 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	NOP4	P37838	685 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	YBP1	P38315	674 aa		4.53	□□□□□ -1.68
PER1	YCR044C	TSC10	P38342	320 aa		4.53	□□□□□ -1.68
PER1	YCR044C	CBR1	P38626	284 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	SAW1	P39735	261 aa		4.53	□□□□□ -1.68
PER1	YCR044C	MKT1	P40850	830 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	ZAP1	P47043	880 aa		4.53	□□□□□ -1.68
PER1	YCR044C	MND1	P53102	219 aa		4.53	□□□□□ -1.68
PER1	YCR044C	NUT1	P53114	1132 aa		4.53	□□□□□ -1.68
PER1	YCR044C	USE1	P53146	245 aa		4.53	□□□□□ -1.68
PER1	YCR044C	YGL036W	P53185	909 aa	Predicted RBP	4.53	□□□□□ -1.68
PER1	YCR044C	COS6	P53344	381 aa		4.53	□□□□□ -1.68
PER1	YCR044C	BIO4	P53630	237 aa		4.53	□□□□□ -1.68
PER1	YCR044C	YNR065C	P53751	1116 aa		4.53	□□□□□ -1.68
PER1	YCR044C	YNL058C	P53947	316 aa		4.53	□□□□□ -1.68
PER1	YCR044C	GPD1	Q00055	391 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	CDC55	Q00362	526 aa		4.53	□□□□□ -1.68
PER1	YCR044C	ATP25	Q03153	612 aa		4.53	□□□□□ -1.68
PER1	YCR044C	YET3	Q07451	203 aa		4.53	□□□□□ -1.68
PER1	YCR044C	GPI13	Q07830	1017 aa		4.53	□□□□□ -1.68
PER1	YCR044C	AIM39	Q08223	395 aa		4.53	□□□□□ -1.68
PER1	YCR044C	CUE5	Q08412	411 aa	Known RBP	4.53	□□□□□ -1.68
PER1	YCR044C	HFI1	Q12060	488 aa		4.53	□□□□□ -1.68
PER1	YCR044C	TRM11	Q12463	433 aa		4.53	□□□□□ -1.68
PER1	YCR044C	YLR278C	Q05854	1341 aa		4.52	□□□□□ -1.69
PER1	YCR044C	ASP3-2	P0CX77	362 aa		4.52	□□□□□ -1.69
PER1	YCR044C	ASP3-3	P0CX78	362 aa		4.52	□□□□□ -1.69
PER1	YCR044C	ASP3-4	P0CX79	362 aa		4.52	□□□□□ -1.69
PER1	YCR044C	ASP3-1	P0CZ17	362 aa		4.52	□□□□□ -1.69
PER1	YCR044C	GPA2	P10823	449 aa		4.52	□□□□□ -1.69
PER1	YCR044C	NPP1	P25353	742 aa		4.52	□□□□□ -1.69
PER1	YCR044C	CDC20	P26309	610 aa		4.52	□□□□□ -1.69
PER1	YCR044C	SKG6	P32900	734 aa	Predicted RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms