RNA–Protein interactions for RNA: YCL037C

SRO9, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SRO9, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRO9	YCL037C	MED1	Q12321	566 aa		4.82	□□□□□ -1.64
SRO9	YCL037C	PCK1	P10963	549 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	SEC12	P11655	471 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	BET2	P20133	325 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	RPT3	P33298	428 aa	Known RBP	4.81	□□□□□ -1.64
SRO9	YCL037C	MRPL36	P36531	177 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	YJL193W	P39542	402 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	MIT1	P40002	666 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	YGR054W	P53235	642 aa	Known RBP	4.81	□□□□□ -1.64
SRO9	YCL037C	SNF12	P53628	566 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	MDM1	Q01846	1127 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	VPS64	Q03944	604 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	YDR179W-A	Q03983	463 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	CSR1	Q06705	408 aa	Known RBP	4.81	□□□□□ -1.64
SRO9	YCL037C	ICL2	Q12031	575 aa		4.81	□□□□□ -1.64
SRO9	YCL037C	GUK1	P15454	187 aa	Known RBP	4.8	□□□□□ -1.64
SRO9	YCL037C	MFT1	P33441	392 aa	Known RBP	4.8	□□□□□ -1.64
SRO9	YCL037C	NOP16	P40007	231 aa	Known RBP	4.8	□□□□□ -1.64
SRO9	YCL037C	YER010C	P40011	234 aa		4.8	□□□□□ -1.64
SRO9	YCL037C	DPH1	P40487	425 aa	Known RBP	4.8	□□□□□ -1.64
SRO9	YCL037C	ASN1	P49089	572 aa	Known RBP	4.8	□□□□□ -1.64
SRO9	YCL037C	MRK1	P50873	501 aa		4.8	□□□□□ -1.64
SRO9	YCL037C	COS12	P53053	380 aa		4.8	□□□□□ -1.64
SRO9	YCL037C	ATG21	Q02887	496 aa		4.8	□□□□□ -1.64
SRO9	YCL037C	NGL2	Q03264	515 aa	Known RBP	4.8	□□□□□ -1.64
SRO9	YCL037C	TRS23	Q03784	219 aa		4.8	□□□□□ -1.64
SRO9	YCL037C	AIM6	Q07716	390 aa		4.8	□□□□□ -1.64
SRO9	YCL037C	CBF2	P32504	956 aa		4.79	□□□□□ -1.64
SRO9	YCL037C	MPE1	P35728	441 aa	Known RBP	4.79	□□□□□ -1.64
SRO9	YCL037C	MUD2	P36084	527 aa	Known RBP	4.79	□□□□□ -1.64
SRO9	YCL037C	UME6	P39001	836 aa		4.79	□□□□□ -1.64
SRO9	YCL037C	PAC2	P39937	518 aa		4.79	□□□□□ -1.64
SRO9	YCL037C	YEL025C	P39991	1188 aa		4.79	□□□□□ -1.64
SRO9	YCL037C	SAP4	P53036	818 aa		4.79	□□□□□ -1.64
SRO9	YCL037C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
SRO9	YCL037C	SAT4	P25333	603 aa	Known RBP	4.78	□□□□□ -1.64
SRO9	YCL037C	RPS7A	P26786	190 aa	Known RBP	4.78	□□□□□ -1.64
SRO9	YCL037C	DSS4	P32601	143 aa		4.78	□□□□□ -1.64
SRO9	YCL037C	STB5	P38699	743 aa		4.78	□□□□□ -1.64
SRO9	YCL037C	ESL1	P40456	1118 aa		4.78	□□□□□ -1.64
SRO9	YCL037C	PSP1	P50896	841 aa	Known RBP	4.78	□□□□□ -1.64
SRO9	YCL037C	ESF2	P53743	316 aa	Known RBP	4.78	□□□□□ -1.64
SRO9	YCL037C	CBK1	P53894	756 aa		4.78	□□□□□ -1.64
SRO9	YCL037C	DAK1	P54838	584 aa	Known RBP	4.78	□□□□□ -1.64
SRO9	YCL037C	FMP30	Q02883	468 aa		4.78	□□□□□ -1.64
SRO9	YCL037C	IMH1	Q06704	911 aa	Known RBP	4.78	□□□□□ -1.64
SRO9	YCL037C	SUL2	Q12325	893 aa		4.78	□□□□□ -1.64
SRO9	YCL037C	INH1	P01097	85 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	CTT1	P06115	562 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	TPK2	P06245	380 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	FUM1	P08417	488 aa	Known RBP	4.77	□□□□□ -1.65
SRO9	YCL037C	SAN1	P22470	610 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	PRE2	P30656	287 aa	Known RBP	4.77	□□□□□ -1.65
SRO9	YCL037C	VPS8	P39702	1274 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	NDE1	P40215	560 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	THI6	P41835	540 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	UPF3	P48412	387 aa	Known RBP	4.77	□□□□□ -1.65
SRO9	YCL037C	MFM1	Q02783	413 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	TSR2	Q06672	205 aa	Known RBP	4.77	□□□□□ -1.65
SRO9	YCL037C	PCD1	Q12524	340 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	YNL162W-A	Q3E7A8	72 aa		4.77	□□□□□ -1.65
SRO9	YCL037C	CDC31	P06704	161 aa	Known RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	VPS34	P22543	875 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	PAH1	P32567	862 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	UGP1	P32861	499 aa	Known RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	TEF4	P36008	412 aa	Known RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	MRPL7	P36519	292 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	IDS2	P46958	469 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	SRB7	P47822	140 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	YPL108W	Q02872	168 aa	Predicted RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	EFR3	Q03653	782 aa	Known RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	SNO4	Q04902	237 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	COQ11	Q05892	277 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	SDH5	Q08230	162 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	SLK19	Q08581	821 aa	Known RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	HSP33	Q08914	237 aa	Known RBP	4.76	□□□□□ -1.65
SRO9	YCL037C	HSP32	Q08992	237 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	COX17	Q12287	69 aa		4.76	□□□□□ -1.65
SRO9	YCL037C	ADE5,7	P07244	802 aa	Known RBP	4.75	□□□□□ -1.65
SRO9	YCL037C	STE4	P18851	423 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	CAP1	P28495	268 aa	Known RBP	4.75	□□□□□ -1.65
SRO9	YCL037C	RAD16	P31244	790 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	YMC1	P32331	307 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	DHR2	P36009	735 aa	Predicted RBP	4.75	□□□□□ -1.65
SRO9	YCL037C	JNM1	P36224	373 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	ARB1	P40024	610 aa	Known RBP	4.75	□□□□□ -1.65
SRO9	YCL037C	RIC1	P40395	1056 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	YIP4	P53093	235 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	CSL4	P53859	292 aa	Predicted RBP	4.75	□□□□□ -1.65
SRO9	YCL037C	THI7	Q05998	598 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	MRI1	Q06489	411 aa	Known RBP	4.75	□□□□□ -1.65
SRO9	YCL037C	VAM6	Q07468	1049 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	ENT1	Q12518	454 aa		4.75	□□□□□ -1.65
SRO9	YCL037C	SEM1	O94742	89 aa		4.74	□□□□□ -1.65
SRO9	YCL037C	TPK1	P06244	397 aa		4.74	□□□□□ -1.65
SRO9	YCL037C	CDC16	P09798	840 aa		4.74	□□□□□ -1.65
SRO9	YCL037C	PET122	P10355	254 aa		4.74	□□□□□ -1.65
SRO9	YCL037C	HOM2	P13663	365 aa	Known RBP	4.74	□□□□□ -1.65
SRO9	YCL037C	AAC3	P18238	307 aa		4.74	□□□□□ -1.65
SRO9	YCL037C	ORC2	P32833	620 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms