RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	CDC26	P14724	124 aa		5.2	□□□□□ -1.58
SLX1	YBR228W	CAP1	P28495	268 aa	Known RBP	5.2	□□□□□ -1.58
SLX1	YBR228W	MNN11	P46985	422 aa	Known RBP	5.2	□□□□□ -1.58
SLX1	YBR228W	PMT3	P47190	753 aa		5.2	□□□□□ -1.58
SLX1	YBR228W	RPS15	Q01855	142 aa	Known RBP	5.2	□□□□□ -1.58
SLX1	YBR228W	RIM15	P43565	1770 aa		5.19	□□□□□ -1.58
SLX1	YBR228W	RPO41	P13433	1351 aa	Known RBP	5.19	□□□□□ -1.58
SLX1	YBR228W	RSF2	P46974	1380 aa		5.19	□□□□□ -1.58
SLX1	YBR228W	YMR084W	A2P2R3	262 aa		5.19	□□□□□ -1.58
SLX1	YBR228W	HMG2	P12684	1045 aa		5.19	□□□□□ -1.58
SLX1	YBR228W	DGR2	P32330	852 aa		5.19	□□□□□ -1.58
SLX1	YBR228W	ENP1	P38333	483 aa	Known RBP	5.19	□□□□□ -1.58
SLX1	YBR228W	YFL015C	P43578	164 aa		5.19	□□□□□ -1.58
SLX1	YBR228W	SQS1	P53866	767 aa	Known RBP	5.19	□□□□□ -1.58
SLX1	YBR228W	ERG13	P54839	491 aa	Known RBP	5.19	□□□□□ -1.58
SLX1	YBR228W	IMH1	Q06704	911 aa	Known RBP	5.19	□□□□□ -1.58
SLX1	YBR228W	PRS5	Q12265	496 aa	Known RBP	5.19	□□□□□ -1.58
SLX1	YBR228W	DID4	P36108	232 aa		5.18	□□□□□ -1.58
SLX1	YBR228W	BRN1	P38170	754 aa		5.18	□□□□□ -1.58
SLX1	YBR228W	APD1	P38281	316 aa		5.18	□□□□□ -1.58
SLX1	YBR228W	ENP2	P48234	707 aa	Known RBP	5.18	□□□□□ -1.58
SLX1	YBR228W	GEP3	Q08622	556 aa		5.18	□□□□□ -1.58
SLX1	YBR228W	FAP7	Q12055	197 aa	Predicted RBP	5.18	□□□□□ -1.58
SLX1	YBR228W	APM4	Q99186	491 aa		5.18	□□□□□ -1.58
SLX1	YBR228W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
SLX1	YBR228W	MF(ALPHA)2	P32435	120 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	MTC7	P32633	139 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	CCL1	P37366	393 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	NMD2	P38798	1089 aa	Known RBP	5.17	□□□□□ -1.58
SLX1	YBR228W	LRO1	P40345	661 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	SNO3	P43544	222 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	YJR142W	P47173	342 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	YDL183C	P48569	320 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	SAP4	P53036	818 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	RRP46	P53256	223 aa	Predicted RBP	5.17	□□□□□ -1.58
SLX1	YBR228W	PAP2	P53632	584 aa	Known RBP	5.17	□□□□□ -1.58
SLX1	YBR228W	WAR1	Q03631	944 aa		5.17	□□□□□ -1.58
SLX1	YBR228W	URE2	P23202	354 aa	Known RBP	5.16	□□□□□ -1.58
SLX1	YBR228W	EXO1	P39875	702 aa		5.16	□□□□□ -1.58
SLX1	YBR228W	NMD5	P46970	1048 aa		5.16	□□□□□ -1.58
SLX1	YBR228W	IOC4	Q04213	475 aa		5.16	□□□□□ -1.58
SLX1	YBR228W	ARR3	Q06598	404 aa		5.16	□□□□□ -1.58
SLX1	YBR228W	YGR161W-C	Q3E744	92 aa		5.16	□□□□□ -1.58
SLX1	YBR228W	SIR4	P11978	1358 aa		5.16	□□□□□ -1.58
SLX1	YBR228W	TSR4	P25040	408 aa		5.15	□□□□□ -1.59
SLX1	YBR228W	YJL193W	P39542	402 aa		5.15	□□□□□ -1.59
SLX1	YBR228W	BPL1	P48445	690 aa	Predicted RBP	5.15	□□□□□ -1.59
SLX1	YBR228W	RNR4	P49723	345 aa	Known RBP	5.15	□□□□□ -1.59
SLX1	YBR228W	YRF1-4	O13559	1382 aa		5.15	□□□□□ -1.59
SLX1	YBR228W	PCK1	P10963	549 aa		5.14	□□□□□ -1.59
SLX1	YBR228W	ECM32	P32644	1121 aa	Known RBP	5.14	□□□□□ -1.59
SLX1	YBR228W	GPP1	P41277	250 aa	Known RBP	5.14	□□□□□ -1.59
SLX1	YBR228W	YGR237C	P50089	785 aa		5.14	□□□□□ -1.59
SLX1	YBR228W	GPG1	P53130	126 aa		5.14	□□□□□ -1.59
SLX1	YBR228W	RSC9	Q03124	581 aa		5.14	□□□□□ -1.59
SLX1	YBR228W	ROM2	P51862	1356 aa	Known RBP	5.14	□□□□□ -1.59
SLX1	YBR228W	VPS33	P20795	691 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	HXT4	P32467	576 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	RMA1	P36001	430 aa	Known RBP	5.13	□□□□□ -1.59
SLX1	YBR228W	YKL133C	P36066	463 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	RTR1	P40084	226 aa	Predicted RBP	5.13	□□□□□ -1.59
SLX1	YBR228W	OPT1	P40897	799 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	DSD1	P53095	428 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	USA1	Q03714	838 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	CIR2	Q08822	631 aa		5.13	□□□□□ -1.59
SLX1	YBR228W	DOT5	P40553	215 aa		5.12	□□□□□ -1.59
SLX1	YBR228W	MPP10	P47083	593 aa	Known RBP	5.12	□□□□□ -1.59
SLX1	YBR228W	BSP1	Q06604	576 aa		5.12	□□□□□ -1.59
SLX1	YBR228W	YDL144C	Q07589	356 aa		5.12	□□□□□ -1.59
SLX1	YBR228W	NGL1	Q08213	363 aa	Known RBP	5.12	□□□□□ -1.59
SLX1	YBR228W	RDL1	Q12305	139 aa	Known RBP	5.12	□□□□□ -1.59
SLX1	YBR228W	TUF1	P02992	437 aa	Known RBP	5.11	□□□□□ -1.59
SLX1	YBR228W	SEC12	P11655	471 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	BET2	P20133	325 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	PRD1	P25375	712 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	HSP104	P31539	908 aa	Known RBP	5.11	□□□□□ -1.59
SLX1	YBR228W	YPT10	P38146	199 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	PEA2	P40091	420 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	BST1	P43571	1029 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	MDR1	P53258	950 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	ADE16	P54113	591 aa	Known RBP	5.11	□□□□□ -1.59
SLX1	YBR228W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
SLX1	YBR228W	PCL8	Q08966	492 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	YPR027C	Q12079	277 aa		5.11	□□□□□ -1.59
SLX1	YBR228W	AHA1	Q12449	350 aa	Known RBP	5.11	□□□□□ -1.59
SLX1	YBR228W	RPP0	P05317	312 aa	Known RBP	5.1	□□□□□ -1.59
SLX1	YBR228W	YPK1	P12688	680 aa	Known RBP	5.1	□□□□□ -1.59
SLX1	YBR228W	AEP2	P22136	580 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	GSY2	P27472	705 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	DAL3	P32459	195 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	EUG1	P32474	517 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	DSS4	P32601	143 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	PRS1	P32895	427 aa	Known RBP	5.1	□□□□□ -1.59
SLX1	YBR228W	JHD1	P40034	492 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	YPL071C	Q02864	156 aa		5.1	□□□□□ -1.59
SLX1	YBR228W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
SLX1	YBR228W	YAP1	P19880	650 aa	Known RBP	5.09	□□□□□ -1.59
SLX1	YBR228W	SER1	P33330	395 aa	Known RBP	5.09	□□□□□ -1.59
SLX1	YBR228W	YIL092W	P40497	633 aa		5.09	□□□□□ -1.59
SLX1	YBR228W	SCW4	P53334	386 aa	Known RBP	5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms