RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	MAD3	P47074	515 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	YDL183C	P48569	320 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	UBA2	P52488	636 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	CRD1	Q07560	283 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	LYS2	P07702	1392 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	SUP35	P05453	685 aa	Known RBP	4.81	□□□□□ -1.64
SHE1	YBL031W	HSP104	P31539	908 aa	Known RBP	4.81	□□□□□ -1.64
SHE1	YBL031W	DBF20	P32328	564 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	CTP1	P38152	299 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	SUL1	P38359	859 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	MPS3	P47069	682 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	CPR6	P53691	371 aa	Known RBP	4.81	□□□□□ -1.64
SHE1	YBL031W	BLS1	Q06071	122 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	YSH1	Q06224	779 aa	Predicted RBP	4.81	□□□□□ -1.64
SHE1	YBL031W	YOL073C	Q08232	322 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	ETT1	Q08421	412 aa	Known RBP	4.81	□□□□□ -1.64
SHE1	YBL031W	MCH5	Q08777	521 aa		4.81	□□□□□ -1.64
SHE1	YBL031W	BMS1	Q08965	1183 aa	Known RBP	4.81	□□□□□ -1.64
SHE1	YBL031W	PHO5	P00635	467 aa		4.8	□□□□□ -1.64
SHE1	YBL031W	APA1	P16550	321 aa	Known RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	PRP45	P28004	379 aa	Predicted RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	MSP1	P28737	362 aa		4.8	□□□□□ -1.64
SHE1	YBL031W	DHR2	P36009	735 aa	Predicted RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	RFC1	P38630	861 aa	Known RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	PPE1	P38796	400 aa		4.8	□□□□□ -1.64
SHE1	YBL031W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SHE1	YBL031W	STT3	P39007	718 aa	Known RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	YEL025C	P39991	1188 aa		4.8	□□□□□ -1.64
SHE1	YBL031W	GSM1	P42950	618 aa		4.8	□□□□□ -1.64
SHE1	YBL031W	PIL1	P53252	339 aa	Known RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	MOT3	P54785	490 aa	Known RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	RGC1	Q06108	1083 aa	Known RBP	4.8	□□□□□ -1.64
SHE1	YBL031W	AAD4	Q07747	329 aa		4.8	□□□□□ -1.64
SHE1	YBL031W	CDC16	P09798	840 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	THR1	P17423	357 aa	Known RBP	4.79	□□□□□ -1.64
SHE1	YBL031W	VPS33	P20795	691 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	SIR1	P21691	654 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	MSS1	P32559	526 aa	Predicted RBP	4.79	□□□□□ -1.64
SHE1	YBL031W	YJL193W	P39542	402 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	TMN3	P40071	706 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	LRO1	P40345	661 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	RSM25	P40496	264 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	SSL2	Q00578	843 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	TIM50	Q02776	476 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	VPS72	Q03388	795 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	IZH3	Q07959	543 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	NKP1	Q12493	238 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	NCB2	Q92317	146 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	SNF2	P22082	1703 aa		4.79	□□□□□ -1.64
SHE1	YBL031W	BNI1	P41832	1953 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	MIS1	P09440	975 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	RNR2	P09938	399 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	SEC18	P18759	758 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	GCD7	P32502	381 aa	Predicted RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	EHT1	P38295	451 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	YHL017W	P38745	532 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	SPC72	P39723	622 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	KHA1	P40309	873 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	RPT2	P40327	437 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	HYR1	P40581	163 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	TCB2	P48231	1178 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	YGR054W	P53235	642 aa	Known RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	IWR1	Q07532	353 aa	Predicted RBP	4.78	□□□□□ -1.64
SHE1	YBL031W	YDL121C	Q07541	149 aa		4.78	□□□□□ -1.64
SHE1	YBL031W	MCM3	P24279	971 aa	Known RBP	4.77	□□□□□ -1.65
SHE1	YBL031W	FUB1	P25659	250 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	SSH4	P32343	579 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	FRD1	P32614	470 aa	Known RBP	4.77	□□□□□ -1.65
SHE1	YBL031W	XRS2	P33301	854 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	PPS1	P38148	807 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	EXO84	P38261	753 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	ARG2	P40360	574 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	FAF1	P40546	346 aa	Predicted RBP	4.77	□□□□□ -1.65
SHE1	YBL031W	ATG4	P53867	494 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	MDG1	P53885	366 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	TRS31	Q03337	283 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	ARA2	Q04212	335 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	CIA1	Q05583	330 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	ENT2	Q05785	613 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	NKP2	Q06162	153 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	YDL086W	Q07505	273 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	MLH3	Q12083	715 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	SLM3	Q12093	417 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	USV1	Q12132	391 aa		4.77	□□□□□ -1.65
SHE1	YBL031W	PCK1	P10963	549 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	VPS34	P22543	875 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	YCL049C	P25577	312 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	BDH2	P39713	417 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	VFA1	P40080	203 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	POL31	P46957	487 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	IML2	P47031	731 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	HST1	P53685	503 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	SMX3	P54999	86 aa	Predicted RBP	4.76	□□□□□ -1.65
SHE1	YBL031W	GTR1	Q00582	310 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	YML131W	Q03102	365 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	VPS64	Q03944	604 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	CSI1	Q04368	295 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	ARR3	Q06598	404 aa		4.76	□□□□□ -1.65
SHE1	YBL031W	ROM2	P51862	1356 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms