RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
HLA-C-210ENST00000640219 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.06■□□□□ 0.32
HLA-C-210ENST00000640219 PTPRFP10586 1907 aa17.06■□□□□ 0.32
HLA-C-210ENST00000640219 PTPRCP08575 1304 aa17.05■□□□□ 0.32
HLA-C-210ENST00000640219 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
HLA-C-210ENST00000640219 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
HLA-C-210ENST00000640219 RGS3P49796 1198 aa17.05■□□□□ 0.32
HLA-C-210ENST00000640219 MAP3K10Q02779 954 aa17.05■□□□□ 0.32
HLA-C-210ENST00000640219 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
HLA-C-210ENST00000640219 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
HLA-C-210ENST00000640219 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
HLA-C-210ENST00000640219 ENTPD3O75355 529 aa17.04■□□□□ 0.32
HLA-C-210ENST00000640219 SLURP2P0DP57 97 aa17.04■□□□□ 0.32
HLA-C-210ENST00000640219 PRDX5P30044 214 aa17.04■□□□□ 0.32
HLA-C-210ENST00000640219 SH3BP5LQ7L8J4 393 aa17.04■□□□□ 0.32
HLA-C-210ENST00000640219 PRUNE2Q8WUY3 3088 aa17.04■□□□□ 0.32
HLA-C-210ENST00000640219 DOCK2Q92608 1830 aa17.03■□□□□ 0.32
HLA-C-210ENST00000640219 LDHBP07195 334 aaKnown RBP17.03■□□□□ 0.32
HLA-C-210ENST00000640219 CACNB2Q08289 660 aaPredicted RBP17.03■□□□□ 0.32
HLA-C-210ENST00000640219 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.32
HLA-C-210ENST00000640219 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
HLA-C-210ENST00000640219 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
HLA-C-210ENST00000640219 IDI2Q9BXS1 227 aa17.03■□□□□ 0.32
HLA-C-210ENST00000640219 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
HLA-C-210ENST00000640219 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
HLA-C-210ENST00000640219 DOCK1Q14185 1865 aa17.02■□□□□ 0.32
HLA-C-210ENST00000640219 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.32
HLA-C-210ENST00000640219 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
HLA-C-210ENST00000640219 FGFR2P21802 821 aa17.02■□□□□ 0.32
HLA-C-210ENST00000640219 LHX8Q68G74 356 aa17.02■□□□□ 0.32
HLA-C-210ENST00000640219 TRMT44Q8IYL2 757 aaKnown RBP17.02■□□□□ 0.32
HLA-C-210ENST00000640219 ANKRD44Q8N8A2 993 aa17.02■□□□□ 0.32
HLA-C-210ENST00000640219 ASCC2Q9H1I8 757 aaPredicted RBP17.02■□□□□ 0.32
HLA-C-210ENST00000640219 TTC28Q96AY4 2481 aa17.02■□□□□ 0.31
HLA-C-210ENST00000640219 PLXNB2O15031 1838 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 FOSL2P15408 326 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-210ENST00000640219 CCND3P30281 292 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-210ENST00000640219 SPP2Q13103 211 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-210ENST00000640219 SENP6Q9GZR1 1112 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-210ENST00000640219 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 MORF4L1Q9UBU8 362 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 PRKAG2Q9UGJ0 569 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 RAPGEFL1Q9UHV5 662 aa17.01■□□□□ 0.31
HLA-C-210ENST00000640219 SLC5A1P13866 664 aa17■□□□□ 0.31
HLA-C-210ENST00000640219 HMGCS2P54868 508 aa17■□□□□ 0.31
HLA-C-210ENST00000640219 SHHQ15465 462 aa17■□□□□ 0.31
HLA-C-210ENST00000640219 SOCS4Q8WXH5 440 aa17■□□□□ 0.31
HLA-C-210ENST00000640219 UTYO14607 1347 aa16.99■□□□□ 0.31
HLA-C-210ENST00000640219 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
HLA-C-210ENST00000640219 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
HLA-C-210ENST00000640219 TJAP1Q5JTD0 557 aa16.99■□□□□ 0.31
HLA-C-210ENST00000640219 ZNF280CQ8ND82 737 aa16.99■□□□□ 0.31
HLA-C-210ENST00000640219 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
HLA-C-210ENST00000640219 TTYH1Q9H313 450 aaPredicted RBP16.99■□□□□ 0.31
HLA-C-210ENST00000640219 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
HLA-C-210ENST00000640219 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
HLA-C-210ENST00000640219 LPIN2Q92539 896 aa16.98■□□□□ 0.31
HLA-C-210ENST00000640219 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
HLA-C-210ENST00000640219 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
HLA-C-210ENST00000640219 DNAH12Q6ZR08 3092 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 TRIM27P14373 513 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 PLA2G5P39877 138 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 SMAD3P84022 425 aaKnown RBP16.97■□□□□ 0.31
HLA-C-210ENST00000640219 PICALMQ13492 652 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 CCL14Q16627 93 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 C9orf50Q5SZB4 431 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 MEIS3Q99687 375 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
HLA-C-210ENST00000640219 RFX7Q2KHR2 1363 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 LOC285556D6RIA3 1793 aa16.97■□□□□ 0.31
HLA-C-210ENST00000640219 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
HLA-C-210ENST00000640219 FAM196BA6NMK8 535 aa16.96■□□□□ 0.31
HLA-C-210ENST00000640219 TBC1D12O60347 775 aa16.96■□□□□ 0.31
HLA-C-210ENST00000640219 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
HLA-C-210ENST00000640219 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
HLA-C-210ENST00000640219 GPRC5AQ8NFJ5 357 aa16.96■□□□□ 0.31
HLA-C-210ENST00000640219 USP6NLQ92738 828 aa16.96■□□□□ 0.31
HLA-C-210ENST00000640219 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
HLA-C-210ENST00000640219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.31
HLA-C-210ENST00000640219 GNL3LQ9NVN8 582 aaKnown RBP16.96■□□□□ 0.31
HLA-C-210ENST00000640219 GAKO14976 1311 aa16.96■□□□□ 0.3
HLA-C-210ENST00000640219 MAST2Q6P0Q8 1798 aa16.95■□□□□ 0.3
HLA-C-210ENST00000640219 PEX10O60683 326 aa16.95■□□□□ 0.3
HLA-C-210ENST00000640219 MAPK4P31152 587 aa16.95■□□□□ 0.3
HLA-C-210ENST00000640219 RGS2P41220 211 aa16.95■□□□□ 0.3
HLA-C-210ENST00000640219 RTP1P59025 263 aa16.95■□□□□ 0.3
HLA-C-210ENST00000640219 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
HLA-C-210ENST00000640219 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
HLA-C-210ENST00000640219 FAM122AQ96E09 287 aa16.95■□□□□ 0.3
HLA-C-210ENST00000640219 P2RX7Q99572 595 aaKnown RBP16.95■□□□□ 0.3
HLA-C-210ENST00000640219 USP17L5A8MUK1 530 aa16.94■□□□□ 0.3
HLA-C-210ENST00000640219 TXNRD2Q9NNW7 524 aa16.94■□□□□ 0.3
HLA-C-210ENST00000640219 DENND2AQ9ULE3 1009 aa16.94■□□□□ 0.3
HLA-C-210ENST00000640219 MUC3AQ02505 3323 aa16.93■□□□□ 0.3
HLA-C-210ENST00000640219 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms