RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 AIDAQ96BJ3 306 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 INTS4Q96HW7 963 aaKnown RBP6.38□□□□□ -1.39
CPNE4-214ENST00000617767 TSPAN18Q96SJ8 248 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
CPNE4-214ENST00000617767 SENP2Q9HC62 589 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 HMG20BQ9P0W2 317 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 ANAPC4Q9UJX5 808 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 MTMR7Q9Y216 660 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 MTMR6Q9Y217 621 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 FHOD1Q9Y613 1164 aa6.38□□□□□ -1.39
CPNE4-214ENST00000617767 MINDY4BA8MYZ0 360 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 B4E1Z4 1266 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 UBE2Q2LH0YL09 131 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 CIAO1O76071 339 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 MBD4O95243 580 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 SKILP12757 684 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 PAX3P23760 479 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 TRIM28Q13263 835 aaKnown RBP6.37□□□□□ -1.39
CPNE4-214ENST00000617767 GIMAP6Q6P9H5 292 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 NFXL1Q6ZNB6 911 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 SPC24Q8NBT2 197 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 SDR42E1Q8WUS8 393 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 MAF1Q9H063 256 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 GOPCQ9HD26 462 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 MYH3P11055 1940 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 ABCC6O95255 1503 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 A0A087WWV3 80 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 EME2A4GXA9 379 aaPredicted RBP6.37□□□□□ -1.39
CPNE4-214ENST00000617767 GOLGA6CA6NDK9 693 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 GOLGA6BA6NDN3 693 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 GOLGA6DP0CG33 693 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 PNMA6AP0CW24 399 aaPredicted RBP6.37□□□□□ -1.39
CPNE4-214ENST00000617767 PUM3Q15397 648 aaKnown RBP6.37□□□□□ -1.39
CPNE4-214ENST00000617767 CCDC152Q4G0S7 254 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 FOXR1Q6PIV2 292 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 CLEC17AQ6ZS10 378 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 SPATA5Q8NB90 893 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 GOLGA6AQ9NYA3 693 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 COL4A1P02462 1669 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 CYP2D7A0A087X1C5 515 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 ZNF213O14771 459 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 FOXP2O15409 715 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 PRDM1O75626 825 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 TRIM37O94972 964 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 NTSR2O95665 410 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 PDE6AP16499 860 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 CCNHP51946 323 aaPredicted RBP6.37□□□□□ -1.39
CPNE4-214ENST00000617767 EVX2Q03828 476 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 PAPPAQ13219 1627 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 RALYLQ86SE5 291 aaKnown RBP6.37□□□□□ -1.39
CPNE4-214ENST00000617767 MICU3Q86XE3 530 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 CCDC26Q8TAB7 109 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 SETDB2Q96T68 719 aa6.37□□□□□ -1.39
CPNE4-214ENST00000617767 AFF2P51816 1311 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 CAPN15O75808 1086 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 POLR3DP05423 398 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 SLC5A1P13866 664 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 PDE6BP35913 854 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 SNX1Q13596 522 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 IMMTQ16891 758 aaKnown RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 WWC2Q6AWC2 1192 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 FAM196AQ6ZSG2 479 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 DHX32Q7L7V1 743 aaKnown RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 AIFM3Q96NN9 605 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 RMI1Q9H9A7 625 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 HELLSQ9NRZ9 838 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 G3BP2Q9UN86 482 aaKnown RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 LAMA4Q16363 1823 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 LTBP4Q8N2S1 1624 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 KLF18A0A0U1RQI7 1052 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 GOLGA6L4A6NEF3 574 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 GOLGA8BA8MQT2 603 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 ERVV-1B6SEH8 477 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 PRC1O43663 620 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 RFC4P35249 363 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 CCDC186Q7Z3E2 898 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 TBC1D10CQ8IV04 446 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 VGLL2Q8N8G2 317 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 LPIN2Q92539 896 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 ZSCAN31Q96LW9 406 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 SH2B1Q9NRF2 756 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 LRP6O75581 1613 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 CPLX2Q6PUV4 134 aaKnown RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 GBP6Q6ZN66 633 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 ADGRA1Q86SQ6 560 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 ANKRD18AQ8IVF6 992 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 SEPT12Q8IYM1 358 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 LCORLQ8N3X6 602 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 APPBP2Q92624 585 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 KCNB2Q92953 911 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 PHKBQ93100 1093 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 AK7Q96M32 723 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 CDCA7Q9BWT1 371 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 TM6SF1Q9BZW5 370 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 ZSCAN16Q9H4T2 348 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-214ENST00000617767 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
CPNE4-214ENST00000617767 THRAP3Q9Y2W1 955 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms