RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
HCG18-242ENST00000602319 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
HCG18-242ENST00000602319 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
HCG18-242ENST00000602319 CTCFLQ8NI51 663 aaPredicted RBP11.29□□□□□ -0.6
HCG18-242ENST00000602319 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
HCG18-242ENST00000602319 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
HCG18-242ENST00000602319 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
HCG18-242ENST00000602319 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
HCG18-242ENST00000602319 KIF5CO60282 957 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 MMP14P50281 582 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 GTF2A1P52655 376 aaPredicted RBP11.28□□□□□ -0.6
HCG18-242ENST00000602319 KRT40Q6A162 431 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 KCNH5Q8NCM2 988 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 CNNM3Q8NE01 707 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 A0A0U1RQJ8 604 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 FOXN1O15353 648 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 PIP4K2BP78356 416 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 CUL4BQ13620 913 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 CLIC6Q96NY7 704 aa11.28□□□□□ -0.6
HCG18-242ENST00000602319 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
HCG18-242ENST00000602319 CTAGE9A4FU28 777 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 H7C1W4 665 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 PRR29P0C7W0 189 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.6
HCG18-242ENST00000602319 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 ZNF662Q6ZS27 426 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.6
HCG18-242ENST00000602319 NCOA7Q8NI08 942 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.6
HCG18-242ENST00000602319 MYH6P13533 1939 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 DISP2A7MBM2 1401 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 CDKL5O76039 1030 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 ZNF790Q6PG37 636 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 NCAPGQ9BPX3 1015 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 ACBD3Q9H3P7 528 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 HOOK1Q9UJC3 728 aaKnown RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 PTPREP23469 700 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 RBL2Q08999 1139 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 NAPGQ99747 312 aaPredicted RBP11.27□□□□□ -0.61
HCG18-242ENST00000602319 ALG1Q9BT22 464 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
HCG18-242ENST00000602319 PLCH1Q4KWH8 1693 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 RREB1Q92766 1687 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 MCM6Q14566 821 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 COPS6Q7L5N1 327 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 TRAPPC11Q7Z392 1133 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 SLC35F6Q8N357 371 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 HPCAL4Q9UM19 191 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 A0A087WUV0 522 aaPredicted RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 FGAP02671 866 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 AIMP1Q12904 312 aaKnown RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 PDILTQ8N807 584 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 CEP89Q96ST8 783 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 FAM204AQ9H8W3 233 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 SAMSN1Q9NSI8 373 aaKnown RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 FAM217BQ9NTX9 383 aaPredicted RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 PUF60Q9UHX1 559 aaKnown RBP11.26□□□□□ -0.61
HCG18-242ENST00000602319 LRP5O75197 1615 aa11.26□□□□□ -0.61
HCG18-242ENST00000602319 CTAGE15A4D2H0 777 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
HCG18-242ENST00000602319 CTAGE8P0CG41 777 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
HCG18-242ENST00000602319 USP14P54578 494 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 EIF5P55010 431 aaKnown RBP11.25□□□□□ -0.61
HCG18-242ENST00000602319 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 TADA2BQ86TJ2 420 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 CTAGE6Q86UF2 777 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 CTAGE4Q8IX94 777 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 FAM107BQ9H098 131 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 UBN2Q6ZU65 1347 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 TEX33O43247 280 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 GYPCP04921 128 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 MMS22LQ6ZRQ5 1243 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 SGMS1Q86VZ5 419 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 TEX2Q8IWB9 1127 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 AIFM3Q96NN9 605 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 PSMD14O00487 310 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 RNF40O75150 1001 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 ZNF569Q5MCW4 686 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 UBE3BQ7Z3V4 1068 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 CNGA4Q8IV77 575 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 NOA1Q8NC60 698 aaKnown RBP11.25□□□□□ -0.61
HCG18-242ENST00000602319 AFAP1L1Q8TED9 768 aa11.25□□□□□ -0.61
HCG18-242ENST00000602319 ANGEL1Q9UNK9 670 aaKnown RBP11.25□□□□□ -0.61
HCG18-242ENST00000602319 LRRC10BA6NIK2 292 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms