RNA–Protein interactions for RNA: ENST00000588276.5

BECN1-208, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-208ENST00000588276 NUDT8Q8WV74 236 aa10.4□□□□□ -0.74
BECN1-208ENST00000588276 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.4□□□□□ -0.744e-8■□□□□ 10.1
BECN1-208ENST00000588276 JPH1Q9HDC5 661 aaPredicted RBP10.4□□□□□ -0.74
BECN1-208ENST00000588276 FAM8A1Q9UBU6 413 aa10.4□□□□□ -0.74
BECN1-208ENST00000588276 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 CNTNAP5Q8WYK1 1306 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 RGS9O75916 674 aaPredicted RBP10.39□□□□□ -0.75
BECN1-208ENST00000588276 USP17L7P0C7H9 530 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 ATF4P18848 351 aaPredicted RBP10.39□□□□□ -0.75
BECN1-208ENST00000588276 PAK2Q13177 524 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 C8orf86Q6ZUL3 223 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 MPHOSPH9Q99550 1183 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 SALL4Q9UJQ4 1053 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
BECN1-208ENST00000588276 PIK3R2O00459 728 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 EREGO14944 169 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 LILRB5O75023 590 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 ST13P50502 369 aaKnown RBP10.38□□□□□ -0.75
BECN1-208ENST00000588276 NCAPG2Q86XI2 1143 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 TTC9Q92623 222 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 PLD4Q96BZ4 506 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 SPACA7Q96KW9 195 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
BECN1-208ENST00000588276 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 RGS17Q9UGC6 210 aaPredicted RBP10.38□□□□□ -0.75
BECN1-208ENST00000588276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.38□□□□□ -0.75
BECN1-208ENST00000588276 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
BECN1-208ENST00000588276 AHDC1Q5TGY3 1603 aaPredicted RBP10.37□□□□□ -0.75
BECN1-208ENST00000588276 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
BECN1-208ENST00000588276 GNB5O14775 395 aa10.37□□□□□ -0.75
BECN1-208ENST00000588276 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
BECN1-208ENST00000588276 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
BECN1-208ENST00000588276 COPRSQ9NQ92 184 aa10.37□□□□□ -0.75
BECN1-208ENST00000588276 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
BECN1-208ENST00000588276 METP08581 1390 aa10.37□□□□□ -0.75
BECN1-208ENST00000588276 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 NID1P14543 1247 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 BMS1Q14692 1282 aaKnown RBP10.36□□□□□ -0.75
BECN1-208ENST00000588276 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 EGFLAMQ63HQ2 1017 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 ERMP1Q7Z2K6 904 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 CEP120Q8N960 986 aa10.36□□□□□ -0.75
BECN1-208ENST00000588276 NPHP3Q7Z494 1330 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 SHPRHQ149N8 1683 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 PTPRUQ92729 1446 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 NEXMIFQ5QGS0 1516 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 AFF1P51825 1210 aaKnown RBP10.35□□□□□ -0.75
BECN1-208ENST00000588276 GRIK5Q16478 980 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 ZNF746Q6NUN9 644 aaPredicted RBP10.35□□□□□ -0.75
BECN1-208ENST00000588276 NXPE4Q6UWF7 544 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 TRIM11Q96F44 468 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 NPHS2Q9NP85 383 aa10.35□□□□□ -0.75
BECN1-208ENST00000588276 PTCH1Q13635 1447 aa10.34□□□□□ -0.75
BECN1-208ENST00000588276 CLTCL1P53675 1640 aa10.34□□□□□ -0.75
BECN1-208ENST00000588276 ATP11AP98196 1134 aa10.34□□□□□ -0.75
BECN1-208ENST00000588276 SRCIN1Q9C0H9 1055 aa10.34□□□□□ -0.75
BECN1-208ENST00000588276 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
BECN1-208ENST00000588276 XRN1Q8IZH2 1706 aaKnown RBP10.33□□□□□ -0.76
BECN1-208ENST00000588276 POLR3DP05423 398 aaPredicted RBP10.33□□□□□ -0.76
BECN1-208ENST00000588276 EDN3P14138 238 aa10.33□□□□□ -0.76
BECN1-208ENST00000588276 RBM6P78332 1123 aaKnown RBP10.33□□□□□ -0.76
BECN1-208ENST00000588276 JAZF1Q86VZ6 243 aa10.33□□□□□ -0.76
BECN1-208ENST00000588276 BCO2Q9BYV7 579 aa10.33□□□□□ -0.76
BECN1-208ENST00000588276 RASSF4Q9H2L5 321 aa10.33□□□□□ -0.76
BECN1-208ENST00000588276 DHX57Q6P158 1386 aaKnown RBP10.33□□□□□ -0.76
BECN1-208ENST00000588276 MST1RQ04912 1400 aa10.33□□□□□ -0.76
BECN1-208ENST00000588276 ACPPP15309 386 aa10.32□□□□□ -0.76
BECN1-208ENST00000588276 PBX4Q9BYU1 374 aa10.32□□□□□ -0.76
BECN1-208ENST00000588276 SUV39H2Q9H5I1 410 aa10.32□□□□□ -0.76
BECN1-208ENST00000588276 KBTBD4Q9NVX7 518 aa10.32□□□□□ -0.76
BECN1-208ENST00000588276 NOP53Q9NZM5 478 aaKnown RBP10.32□□□□□ -0.76
BECN1-208ENST00000588276 ASXL1Q8IXJ9 1541 aa10.32□□□□□ -0.76
BECN1-208ENST00000588276 GADD45BO75293 160 aaPredicted RBP10.31□□□□□ -0.76
BECN1-208ENST00000588276 SMNDC1O75940 238 aaKnown RBP eCLIP10.31□□□□□ -0.76
BECN1-208ENST00000588276 KCNMA1Q12791 1236 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 GALNT12Q8IXK2 581 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 CKAP2LQ8IYA6 745 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 RASGRP4Q8TDF6 673 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 PLVAPQ9BX97 442 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 DZANK1Q9NVP4 752 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 NRXN3Q9Y4C0 1643 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 AFF2P51816 1311 aa10.31□□□□□ -0.76
BECN1-208ENST00000588276 C1orf167Q5SNV9 1468 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 ABCC11Q96J66 1382 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 PPLO60437 1756 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 TCEAL1Q15170 157 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 MSL1Q68DK7 614 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 CHMP4AQ9BY43 222 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 STK26Q9P289 416 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
BECN1-208ENST00000588276 TRIM33Q9UPN9 1127 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 PRAG1Q86YV5 1406 aa10.3□□□□□ -0.76
BECN1-208ENST00000588276 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
BECN1-208ENST00000588276 SPDYE3A6NKU9 549 aa10.29□□□□□ -0.76
BECN1-208ENST00000588276 NFKBIEO00221 500 aa10.29□□□□□ -0.76
BECN1-208ENST00000588276 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms