RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 NPATQ14207 1427 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 NCOA1Q15788 1441 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 SAMD9LQ8IVG5 1584 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
KARSP3-201ENST00000571212 BRD1O95696 1058 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 ASPAP45381 313 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 PTPN12Q05209 780 aaKnown RBP7.55□□□□□ -1.2
KARSP3-201ENST00000571212 DTHD1Q6ZMT9 781 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 DDX54Q8TDD1 881 aaKnown RBP7.55□□□□□ -1.2
KARSP3-201ENST00000571212 GATA6Q92908 595 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 SEMA6CQ9H3T2 930 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 CCDC86Q9H6F5 360 aaKnown RBP7.55□□□□□ -1.2
KARSP3-201ENST00000571212 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
KARSP3-201ENST00000571212 LOC105371045A0A1W2PR82 267 aa7.54□□□□□ -1.2
KARSP3-201ENST00000571212 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
KARSP3-201ENST00000571212 MAPK1P28482 360 aa7.54□□□□□ -1.2
KARSP3-201ENST00000571212 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
KARSP3-201ENST00000571212 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
KARSP3-201ENST00000571212 TRAK1Q9UPV9 953 aa7.54□□□□□ -1.2
KARSP3-201ENST00000571212 SUPT6HQ7KZ85 1726 aaKnown RBP7.54□□□□□ -1.2
KARSP3-201ENST00000571212 FYCO1Q9BQS8 1478 aa7.54□□□□□ -1.2
KARSP3-201ENST00000571212 PNMA6FA0A0J9YX94 578 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 DSC3Q14574 896 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
KARSP3-201ENST00000571212 NXPE4Q6UWF7 544 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 SPATA31D1Q6ZQQ2 1576 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 GIMAP7Q8NHV1 300 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 YIPF2Q9BWQ6 316 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 NLRP2Q9NX02 1062 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 CAMSAP1Q5T5Y3 1602 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 ZMYM3Q14202 1370 aa7.53□□□□□ -1.2
KARSP3-201ENST00000571212 PLCB3Q01970 1234 aa7.52□□□□□ -1.2
KARSP3-201ENST00000571212 AP3B2Q13367 1082 aa7.52□□□□□ -1.2
KARSP3-201ENST00000571212 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.2
KARSP3-201ENST00000571212 MCTP1Q6DN14 999 aa7.52□□□□□ -1.2
KARSP3-201ENST00000571212 SETDB2Q96T68 719 aa7.52□□□□□ -1.2
KARSP3-201ENST00000571212 GSX1Q9H4S2 264 aaPredicted RBP7.52□□□□□ -1.2
KARSP3-201ENST00000571212 ZFYVE1Q9HBF4 777 aa7.52□□□□□ -1.2
KARSP3-201ENST00000571212 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.2
KARSP3-201ENST00000571212 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.2
KARSP3-201ENST00000571212 PLEKHH2Q8IVE3 1493 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 ZNF142P52746 1687 aaPredicted RBP7.52□□□□□ -1.21
KARSP3-201ENST00000571212 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
KARSP3-201ENST00000571212 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
KARSP3-201ENST00000571212 SYCP2Q9BX26 1530 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 GPATCH8Q9UKJ3 1502 aaKnown RBP7.52□□□□□ -1.21
KARSP3-201ENST00000571212 KIAA1107Q9UPP5 1409 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 ZNF862O60290 1169 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 WNT11O96014 354 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 FOSL1P15407 271 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 MSMPQ1L6U9 139 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 HP1BP3Q5SSJ5 553 aaPredicted RBP7.52□□□□□ -1.21
KARSP3-201ENST00000571212 STK35Q8TDR2 534 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 AKAP2Q9Y2D5 859 aa7.52□□□□□ -1.21
KARSP3-201ENST00000571212 ATP7AQ04656 1500 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 PLXNC1O60486 1568 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 INO80Q9ULG1 1556 aaPredicted RBP7.51□□□□□ -1.21
KARSP3-201ENST00000571212 A2MP01023 1474 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 PLA2R1Q13018 1463 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.51□□□□□ -1.21
KARSP3-201ENST00000571212 TMPRSS2O15393 492 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 CYP26A1O43174 497 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 TREHO43280 583 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 HNRNPMP52272 730 aaKnown RBP eCLIP7.51□□□□□ -1.21
KARSP3-201ENST00000571212 MAP7Q14244 749 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 SEZ6L2Q6UXD5 910 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 ZNF765Q7L2R6 523 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
KARSP3-201ENST00000571212 MYO3AQ8NEV4 1616 aa7.5□□□□□ -1.21
KARSP3-201ENST00000571212 ADGBQ8N7X0 1667 aa7.5□□□□□ -1.21
KARSP3-201ENST00000571212 GSTP1P09211 210 aaKnown RBP7.5□□□□□ -1.21
KARSP3-201ENST00000571212 IRAK1P51617 712 aa7.5□□□□□ -1.21
KARSP3-201ENST00000571212 ENOX2Q16206 610 aaKnown RBP7.5□□□□□ -1.21
KARSP3-201ENST00000571212 LRRC4CQ9HCJ2 640 aa7.5□□□□□ -1.21
KARSP3-201ENST00000571212 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
KARSP3-201ENST00000571212 PTPRKQ15262 1439 aa7.5□□□□□ -1.21
KARSP3-201ENST00000571212 CEP170BQ9Y4F5 1589 aaPredicted RBP7.49□□□□□ -1.21
KARSP3-201ENST00000571212 PDZD3Q86UT5 571 aa7.49□□□□□ -1.21
KARSP3-201ENST00000571212 KCNB2Q92953 911 aa7.49□□□□□ -1.21
KARSP3-201ENST00000571212 METTL22Q9BUU2 404 aaPredicted RBP7.49□□□□□ -1.21
KARSP3-201ENST00000571212 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
KARSP3-201ENST00000571212 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
KARSP3-201ENST00000571212 CFDP1Q9UEE9 299 aaPredicted RBP7.49□□□□□ -1.21
KARSP3-201ENST00000571212 WWC3Q9ULE0 1092 aa7.49□□□□□ -1.21
KARSP3-201ENST00000571212 TCOF1Q13428 1488 aaKnown RBP7.49□□□□□ -1.21
KARSP3-201ENST00000571212 TAL1P17542 331 aaPredicted RBP7.48□□□□□ -1.21
KARSP3-201ENST00000571212 MAPK8P45983 427 aa7.48□□□□□ -1.21
KARSP3-201ENST00000571212 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
KARSP3-201ENST00000571212 FANCD2OSQ96PS1 177 aa7.48□□□□□ -1.21
KARSP3-201ENST00000571212 PPP4R2Q9NY27 417 aa7.48□□□□□ -1.21
KARSP3-201ENST00000571212 ZNF335Q9H4Z2 1342 aaPredicted RBP7.48□□□□□ -1.21
KARSP3-201ENST00000571212 CCNB3Q8WWL7 1395 aa7.48□□□□□ -1.21
KARSP3-201ENST00000571212 GGT6Q6P531 493 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 C3orf58Q8NDZ4 430 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms