RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 NRXN1Q9ULB1 1477 aa14.3□□□□□ -0.12
AP3B2-210ENST00000543938 SMIM24O75264 130 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 ATP4AP20648 1035 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 SFPQP23246 707 aaKnown RBP eCLIP14.29□□□□□ -0.12
AP3B2-210ENST00000543938 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
AP3B2-210ENST00000543938 SLC4A8Q2Y0W8 1093 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 NUGGCQ68CJ6 796 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 KLHL10Q6JEL2 608 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 ARMCX5Q6P1M9 558 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 APLFQ8IW19 511 aaPredicted RBP14.29□□□□□ -0.12
AP3B2-210ENST00000543938 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 RUFY1Q96T51 708 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 CORO1BQ9BR76 489 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 ZCWPW1Q9H0M4 648 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 C15orf41Q9Y2V0 281 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 LRRC7Q96NW7 1537 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 CHMP4BP1P59074 171 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 SRGAP1Q7Z6B7 1085 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 LSM14AQ8ND56 463 aaKnown RBP14.29□□□□□ -0.12
AP3B2-210ENST00000543938 GPCPD1Q9NPB8 672 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 DDX19AQ9NUU7 478 aaKnown RBP14.29□□□□□ -0.12
AP3B2-210ENST00000543938 RGS12O14924 1447 aa14.29□□□□□ -0.12
AP3B2-210ENST00000543938 SETD1AO15047 1707 aaKnown RBP14.29□□□□□ -0.12
AP3B2-210ENST00000543938 DESP17661 470 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 FLT3P36888 993 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 DYNC1I2Q13409 638 aaKnown RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 ADGRF5Q8IZF2 1346 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 ALKQ9UM73 1620 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 BECN2A8MW95 431 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 STX6O43752 255 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 PPP1R15BQ5SWA1 713 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 TTC22Q5TAA0 569 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 ATF7IPQ6VMQ6 1270 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 RNF168Q8IYW5 571 aaPredicted RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 NUP58Q9BVL2 599 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 NDUFAB1O14561 156 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 STIP1P31948 543 aaKnown RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 ADCY1Q08828 1119 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 ENOX2Q16206 610 aaKnown RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 CCDC92Q53HC0 331 aaPredicted RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 EHD4Q9H223 541 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 CLSTN2Q9H4D0 955 aa14.28□□□□□ -0.12
AP3B2-210ENST00000543938 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 IQSEC3Q9UPP2 1182 aaPredicted RBP14.28□□□□□ -0.12
AP3B2-210ENST00000543938 MYO1BO43795 1136 aa14.27□□□□□ -0.12
AP3B2-210ENST00000543938 ZNF202O95125 648 aa14.27□□□□□ -0.12
AP3B2-210ENST00000543938 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.12
AP3B2-210ENST00000543938 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.12
AP3B2-210ENST00000543938 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.12
AP3B2-210ENST00000543938 CUL4BQ13620 913 aa14.27□□□□□ -0.12
AP3B2-210ENST00000543938 PABPC1LQ4VXU2 614 aaKnown RBP14.27□□□□□ -0.12
AP3B2-210ENST00000543938 GALNT17Q6IS24 598 aa14.27□□□□□ -0.12
AP3B2-210ENST00000543938 JAKMIP2Q96AA8 810 aa14.27□□□□□ -0.12
AP3B2-210ENST00000543938 POLR3AO14802 1390 aaPredicted RBP14.27□□□□□ -0.13
AP3B2-210ENST00000543938 CEP104O60308 925 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
AP3B2-210ENST00000543938 YY1P25490 414 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.13
AP3B2-210ENST00000543938 GNGT1P63211 74 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 CRELD2Q6UXH1 353 aaPredicted RBP14.27□□□□□ -0.13
AP3B2-210ENST00000543938 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 ZFATQ9P243 1243 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 TUBGCP4Q9UGJ1 667 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 GMEB1Q9Y692 573 aa14.27□□□□□ -0.13
AP3B2-210ENST00000543938 BUB1BO60566 1050 aaPredicted RBP14.26□□□□□ -0.13
AP3B2-210ENST00000543938 CCDC175P0C221 793 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 GNAQP50148 359 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 DNM1Q05193 864 aaKnown RBP14.26□□□□□ -0.13
AP3B2-210ENST00000543938 MYO1EQ12965 1108 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 BTG3Q14201 252 aaPredicted RBP14.26□□□□□ -0.13
AP3B2-210ENST00000543938 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
AP3B2-210ENST00000543938 RABL2BQ9UNT1 228 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 METP08581 1390 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 CTCFP49711 727 aaPredicted RBP14.26□□□□□ -0.13
AP3B2-210ENST00000543938 OLFML1Q6UWY5 402 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 CCDC125Q86Z20 511 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 PLEKHM2Q8IWE5 1019 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 WDR35Q9P2L0 1181 aa14.26□□□□□ -0.13
AP3B2-210ENST00000543938 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 WDHD1O75717 1129 aaPredicted RBP14.25□□□□□ -0.13
AP3B2-210ENST00000543938 GBP7Q8N8V2 638 aaPredicted RBP14.25□□□□□ -0.13
AP3B2-210ENST00000543938 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 SH3GL2Q99962 352 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 AATFQ9NY61 560 aaKnown RBP eCLIP14.25□□□□□ -0.13
AP3B2-210ENST00000543938 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
AP3B2-210ENST00000543938 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 PRAG1Q86YV5 1406 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 CUTAO60888 179 aa14.25□□□□□ -0.13
AP3B2-210ENST00000543938 PENKP01210 267 aaPredicted RBP14.25□□□□□ -0.13
AP3B2-210ENST00000543938 CNGA1P29973 690 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms