RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
AP3B2-210ENST00000543938 PELP1Q8IZL8 1130 aaKnown RBP22.97■■□□□ 1.27
AP3B2-210ENST00000543938 MYT1Q01538 1121 aa22.58■■□□□ 1.21
AP3B2-210ENST00000543938 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
AP3B2-210ENST00000543938 HRCP23327 699 aa21.47■■□□□ 1.03
AP3B2-210ENST00000543938 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
AP3B2-210ENST00000543938 PRKCSHP14314 528 aaPredicted RBP21.06■□□□□ 0.96
AP3B2-210ENST00000543938 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
AP3B2-210ENST00000543938 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
AP3B2-210ENST00000543938 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
AP3B2-210ENST00000543938 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
AP3B2-210ENST00000543938 APLP2Q06481 763 aa20.66■□□□□ 0.9
AP3B2-210ENST00000543938 SLC24A1O60721 1099 aa20.53■□□□□ 0.88
AP3B2-210ENST00000543938 ABCC9O60706 1549 aa20.47■□□□□ 0.87
AP3B2-210ENST00000543938 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
AP3B2-210ENST00000543938 CENPBP07199 599 aaPredicted RBP20.21■□□□□ 0.83
AP3B2-210ENST00000543938 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
AP3B2-210ENST00000543938 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
AP3B2-210ENST00000543938 GTF3C3Q9Y5Q9 886 aa19.94■□□□□ 0.78
AP3B2-210ENST00000543938 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
AP3B2-210ENST00000543938 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
AP3B2-210ENST00000543938 NACADO15069 1562 aa19.82■□□□□ 0.76
AP3B2-210ENST00000543938 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
AP3B2-210ENST00000543938 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
AP3B2-210ENST00000543938 ANP32EQ9BTT0 268 aa19.79■□□□□ 0.76
AP3B2-210ENST00000543938 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
AP3B2-210ENST00000543938 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
AP3B2-210ENST00000543938 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
AP3B2-210ENST00000543938 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
AP3B2-210ENST00000543938 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
AP3B2-210ENST00000543938 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
AP3B2-210ENST00000543938 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
AP3B2-210ENST00000543938 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
AP3B2-210ENST00000543938 UBE2Q2Q8WVN8 375 aa19.21■□□□□ 0.67
AP3B2-210ENST00000543938 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
AP3B2-210ENST00000543938 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
AP3B2-210ENST00000543938 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
AP3B2-210ENST00000543938 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
AP3B2-210ENST00000543938 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
AP3B2-210ENST00000543938 TSHZ2Q9NRE2 1034 aa19.01■□□□□ 0.63
AP3B2-210ENST00000543938 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
AP3B2-210ENST00000543938 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
AP3B2-210ENST00000543938 CLSPNQ9HAW4 1339 aa18.84■□□□□ 0.61
AP3B2-210ENST00000543938 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
AP3B2-210ENST00000543938 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
AP3B2-210ENST00000543938 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
AP3B2-210ENST00000543938 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
AP3B2-210ENST00000543938 PKNOX2Q96KN3 472 aa18.71■□□□□ 0.59
AP3B2-210ENST00000543938 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
AP3B2-210ENST00000543938 PODXL2Q9NZ53 605 aa18.69■□□□□ 0.58
AP3B2-210ENST00000543938 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
AP3B2-210ENST00000543938 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
AP3B2-210ENST00000543938 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
AP3B2-210ENST00000543938 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
AP3B2-210ENST00000543938 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
AP3B2-210ENST00000543938 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
AP3B2-210ENST00000543938 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
AP3B2-210ENST00000543938 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
AP3B2-210ENST00000543938 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
AP3B2-210ENST00000543938 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
AP3B2-210ENST00000543938 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
AP3B2-210ENST00000543938 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
AP3B2-210ENST00000543938 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.54
AP3B2-210ENST00000543938 MSH5O43196 834 aa18.39■□□□□ 0.53
AP3B2-210ENST00000543938 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
AP3B2-210ENST00000543938 MIER1Q8N108 512 aa18.31■□□□□ 0.52
AP3B2-210ENST00000543938 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
AP3B2-210ENST00000543938 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
AP3B2-210ENST00000543938 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
AP3B2-210ENST00000543938 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
AP3B2-210ENST00000543938 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
AP3B2-210ENST00000543938 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
AP3B2-210ENST00000543938 CCER1Q8TC90 406 aaPredicted RBP18.24■□□□□ 0.51
AP3B2-210ENST00000543938 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
AP3B2-210ENST00000543938 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
AP3B2-210ENST00000543938 NEFLP07196 543 aa18.18■□□□□ 0.5
AP3B2-210ENST00000543938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
AP3B2-210ENST00000543938 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
AP3B2-210ENST00000543938 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
AP3B2-210ENST00000543938 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
AP3B2-210ENST00000543938 IL27Q8NEV9 243 aa18.08■□□□□ 0.48
AP3B2-210ENST00000543938 WIZO95785 1651 aa18.06■□□□□ 0.48
AP3B2-210ENST00000543938 PDE4CQ08493 712 aa18■□□□□ 0.47
AP3B2-210ENST00000543938 GLIPR1L2Q4G1C9 344 aa18■□□□□ 0.47
AP3B2-210ENST00000543938 PDIA4P13667 645 aaKnown RBP17.99■□□□□ 0.47
AP3B2-210ENST00000543938 ZMYND15Q9H091 742 aa17.98■□□□□ 0.47
AP3B2-210ENST00000543938 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
AP3B2-210ENST00000543938 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
AP3B2-210ENST00000543938 KLHL34Q8N239 644 aa17.95■□□□□ 0.46
AP3B2-210ENST00000543938 ARXQ96QS3 562 aa17.92■□□□□ 0.46
AP3B2-210ENST00000543938 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
AP3B2-210ENST00000543938 FGD1P98174 961 aa17.91■□□□□ 0.46
AP3B2-210ENST00000543938 BCANQ96GW7 911 aa17.9■□□□□ 0.46
AP3B2-210ENST00000543938 FKBP8Q14318 412 aa17.83■□□□□ 0.44
AP3B2-210ENST00000543938 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
AP3B2-210ENST00000543938 AAMPQ13685 434 aa17.79■□□□□ 0.44
AP3B2-210ENST00000543938 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
AP3B2-210ENST00000543938 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
AP3B2-210ENST00000543938 C11orf95C9JLR9 678 aaPredicted RBP17.76■□□□□ 0.43
AP3B2-210ENST00000543938 NESP48681 1621 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms