RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 RELL1Q8IUW5 271 aa12.27□□□□□ -0.45
MRPS35-204ENST00000542199 DTWD1Q8N5C7 304 aa12.27□□□□□ -0.45
MRPS35-204ENST00000542199 KLHL23Q8NBE8 558 aa12.27□□□□□ -0.45
MRPS35-204ENST00000542199 RHOVQ96L33 236 aa12.27□□□□□ -0.45
MRPS35-204ENST00000542199 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
MRPS35-204ENST00000542199 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.45
MRPS35-204ENST00000542199 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
MRPS35-204ENST00000542199 ARNTP27540 789 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 RAC1P63000 192 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 SUZ12Q15022 739 aaKnown RBP12.26□□□□□ -0.45
MRPS35-204ENST00000542199 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 AGMOQ6ZNB7 445 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 FBXO11Q86XK2 927 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 MAP4K3Q8IVH8 894 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
MRPS35-204ENST00000542199 USP26Q9BXU7 913 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 TGIF2Q9GZN2 237 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 CBX8Q9HC52 389 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
MRPS35-204ENST00000542199 PCDHB5Q9Y5E4 795 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 TNRQ92752 1358 aa12.26□□□□□ -0.45
MRPS35-204ENST00000542199 DLL1O00548 723 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 MAOBP27338 520 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 CD68P34810 354 aaPredicted RBP12.25□□□□□ -0.45
MRPS35-204ENST00000542199 FAM160A1Q05DH4 1040 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 PODNQ7Z5L7 613 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 UBASH3BQ8TF42 649 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 ABCC5O15440 1437 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
MRPS35-204ENST00000542199 RNF17Q9BXT8 1623 aaKnown RBP12.25□□□□□ -0.45
MRPS35-204ENST00000542199 WISP1O95388 367 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 GSTP1P09211 210 aaKnown RBP12.24□□□□□ -0.45
MRPS35-204ENST00000542199 RLBP1P12271 317 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 ZNF252P-AS1Q0IIN9 211 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 POU4F3Q15319 338 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 FGD6Q6ZV73 1430 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 CCSER2Q9H7U1 834 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 ADAMTS1Q9UHI8 967 aa12.24□□□□□ -0.45
MRPS35-204ENST00000542199 ABCC3O15438 1527 aa12.23□□□□□ -0.45
MRPS35-204ENST00000542199 DLGAP3O95886 979 aa12.23□□□□□ -0.45
MRPS35-204ENST00000542199 PF4P02776 101 aa12.23□□□□□ -0.45
MRPS35-204ENST00000542199 TNNI2P48788 182 aa12.23□□□□□ -0.45
MRPS35-204ENST00000542199 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
MRPS35-204ENST00000542199 SAMM50Q9Y512 469 aa12.23□□□□□ -0.45
MRPS35-204ENST00000542199 DUOX2Q9NRD8 1548 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 KIF15Q9NS87 1388 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 LOC100289279A0A1B0GTE1 492 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 CYP11A1P05108 521 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 RPS26P62854 115 aaKnown RBP12.22□□□□□ -0.45
MRPS35-204ENST00000542199 PWP1Q13610 501 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 SEPT6Q14141 434 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 MAP1SQ66K74 1059 aaPredicted RBP12.22□□□□□ -0.45
MRPS35-204ENST00000542199 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 KCNB2Q92953 911 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 CORO1BQ9BR76 489 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
MRPS35-204ENST00000542199 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
MRPS35-204ENST00000542199 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
MRPS35-204ENST00000542199 NLRP1Q9C000 1473 aa12.21□□□□□ -0.45
MRPS35-204ENST00000542199 GARTP22102 1010 aa12.21□□□□□ -0.45
MRPS35-204ENST00000542199 COL8A1P27658 744 aa12.21□□□□□ -0.45
MRPS35-204ENST00000542199 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
MRPS35-204ENST00000542199 CAMK2GQ13555 558 aaPredicted RBP12.21□□□□□ -0.45
MRPS35-204ENST00000542199 BEND7Q8N7W2 519 aaPredicted RBP12.21□□□□□ -0.45
MRPS35-204ENST00000542199 GAL3ST3Q96A11 431 aa12.21□□□□□ -0.45
MRPS35-204ENST00000542199 EMILIN2Q9BXX0 1053 aa12.21□□□□□ -0.45
MRPS35-204ENST00000542199 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
MRPS35-204ENST00000542199 MROH1Q8NDA8 1641 aa12.21□□□□□ -0.46
MRPS35-204ENST00000542199 DAPK1P53355 1430 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 PIK3R2O00459 728 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 EIF4A3P38919 411 aaKnown RBP12.2□□□□□ -0.46
MRPS35-204ENST00000542199 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
MRPS35-204ENST00000542199 GRIK4Q16099 956 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 SHISA2Q6UWI4 295 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 CYP8B1Q9UNU6 501 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
MRPS35-204ENST00000542199 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
MRPS35-204ENST00000542199 ELNP15502 786 aa12.19□□□□□ -0.46
MRPS35-204ENST00000542199 LMNB2Q03252 620 aa12.19□□□□□ -0.46
MRPS35-204ENST00000542199 FBXL19Q6PCT2 694 aa12.19□□□□□ -0.46
MRPS35-204ENST00000542199 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
MRPS35-204ENST00000542199 NOP53Q9NZM5 478 aaKnown RBP12.19□□□□□ -0.46
MRPS35-204ENST00000542199 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 LRRC14Q15048 493 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 PRRT3Q5FWE3 981 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 GPBAR1Q8TDU6 330 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 WDR89Q96FK6 387 aaPredicted RBP12.18□□□□□ -0.46
MRPS35-204ENST00000542199 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 SPON2Q9BUD6 331 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 RRP7BPQ9NSQ0 103 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 ZC3H13Q5T200 1668 aaKnown RBP12.18□□□□□ -0.46
MRPS35-204ENST00000542199 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
MRPS35-204ENST00000542199 PRDM15P57071 1507 aaPredicted RBP12.17□□□□□ -0.46
MRPS35-204ENST00000542199 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms