RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 CCDC82Q8N4S0 544 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 IP6K1Q92551 441 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 OSBP2Q969R2 916 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 CAPZA3Q96KX2 299 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 NAA15Q9BXJ9 866 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 TTF2Q9UNY4 1162 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 H0YHG0 523 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 CCT5P48643 541 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 ARHGEF25Q86VW2 580 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 HPS5Q9UPZ3 1129 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 PTPRUQ92729 1446 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 EBAG9O00559 213 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 FGAP02671 866 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 CTCFLQ8NI51 663 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 RIN2Q8WYP3 895 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 MYO6Q9UM54 1294 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 ABCC6O95255 1503 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 SETQ01105 290 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 SLC9C2Q5TAH2 1124 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 CCDC91Q7Z6B0 441 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 CNGA4Q8IV77 575 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 TEX13AQ9BXU3 409 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 KCNG1Q9UIX4 513 aa14.57□□□□□ -0.08
SFSWAP-209ENST00000540469 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 ZMYND10O75800 440 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 CHRM1P11229 460 aaPredicted RBP14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 STIM1Q13586 685 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 MMS22LQ6ZRQ5 1243 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 MYL10Q9BUA6 226 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 GOLGA8AA7E2F4 631 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 KCNA6P17658 529 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 ANKLE2Q86XL3 938 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 MYH15Q9Y2K3 1946 aa14.56□□□□□ -0.08
SFSWAP-209ENST00000540469 N4BP3O15049 544 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 RPS6KA5O75582 802 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 RFX5P48382 616 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 FAM76AQ8TAV0 307 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 SYNRGQ9UMZ2 1314 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 KDM4FA0A1W2PPD8 638 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 SHTN1A0MZ66 631 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 ENC1O14682 589 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 PTPAQ15257 358 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 NALCNQ8IZF0 1738 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 NR1I3Q14994 352 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 MCTP2Q6DN12 878 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 ANKRD20A12PQ8NF67 263 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 FAM212AQ96EL1 285 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 HINFPQ9BQA5 517 aa14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 ANGEL1Q9UNK9 670 aaKnown RBP14.55□□□□□ -0.08
SFSWAP-209ENST00000540469 ZBTB43O43298 467 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 MFAP3LO75121 409 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 COBLO75128 1261 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 ZNF18P17022 549 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 MCM3P25205 808 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 USP8P40818 1118 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 PLCD1P51178 756 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 WWC3Q9ULE0 1092 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 PALLDQ8WX93 1383 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 GOLGA6CA6NDK9 693 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 GOLGA6DP0CG33 693 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 CCDC70Q6NSX1 233 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 CTAGE1Q96RT6 745 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 GOLGA6AQ9NYA3 693 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 CEP126Q9P2H0 1117 aa14.54□□□□□ -0.08
SFSWAP-209ENST00000540469 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 CT47A1Q5JQC4 288 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 GSPT2Q8IYD1 628 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 SMYD4Q8IYR2 804 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 RUFY1Q96T51 708 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 VPS16Q9H269 839 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 A0A1B0GTH6 734 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 BTBD18B2RXH4 712 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 ANTXR2P58335 489 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 GRIN1Q05586 938 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 SSRP1Q08945 709 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 KANK3Q6NY19 840 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 RASGRP2Q7LDG7 609 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 TMTC1Q8IUR5 882 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 CCDC85AQ96PX6 553 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 ABL1P00519 1130 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 PDIA6Q15084 440 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 ZNF790Q6PG37 636 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 BANK1Q8NDB2 785 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 KCNJ14Q9UNX9 436 aa14.53□□□□□ -0.08
SFSWAP-209ENST00000540469 IL15P40933 162 aaPredicted RBP14.52□□□□□ -0.08
SFSWAP-209ENST00000540469 BCAS4Q8TDM0 211 aa14.52□□□□□ -0.08
SFSWAP-209ENST00000540469 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.09
SFSWAP-209ENST00000540469 B4E1Z4 1266 aa14.52□□□□□ -0.09
SFSWAP-209ENST00000540469 PSEN1P49768 467 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms