RNA–Protein interactions for RNA: ENST00000528847.1

RPS3-211, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-211ENST00000528847 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
RPS3-211ENST00000528847 LPIN2Q92539 896 aa12.66□□□□□ -0.38
RPS3-211ENST00000528847 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
RPS3-211ENST00000528847 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 SLC5A1P13866 664 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 CYP2B6P20813 491 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
RPS3-211ENST00000528847 SPP2Q13103 211 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 MAP3K21Q5TCX8 1036 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
RPS3-211ENST00000528847 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 RFX7Q2KHR2 1363 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
RPS3-211ENST00000528847 EYA2O00167 538 aa12.64□□□□□ -0.39
RPS3-211ENST00000528847 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
RPS3-211ENST00000528847 GCLCP48506 637 aaPredicted RBP12.64□□□□□ -0.39
RPS3-211ENST00000528847 HMGCS2P54868 508 aa12.64□□□□□ -0.39
RPS3-211ENST00000528847 PICALMQ13492 652 aa12.64□□□□□ -0.39
RPS3-211ENST00000528847 RRP1BQ14684 758 aaKnown RBP12.64□□□□□ -0.39
RPS3-211ENST00000528847 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
RPS3-211ENST00000528847 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
RPS3-211ENST00000528847 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
RPS3-211ENST00000528847 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
RPS3-211ENST00000528847 GAKO14976 1311 aa12.63□□□□□ -0.39
RPS3-211ENST00000528847 SALL1Q9NSC2 1324 aa12.63□□□□□ -0.39
RPS3-211ENST00000528847 PHKA1P46020 1223 aa12.63□□□□□ -0.39
RPS3-211ENST00000528847 CACNB2Q08289 660 aaPredicted RBP12.63□□□□□ -0.39
RPS3-211ENST00000528847 LHX8Q68G74 356 aa12.63□□□□□ -0.39
RPS3-211ENST00000528847 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
RPS3-211ENST00000528847 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
RPS3-211ENST00000528847 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
RPS3-211ENST00000528847 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
RPS3-211ENST00000528847 CCND3P30281 292 aaPredicted RBP12.62□□□□□ -0.39
RPS3-211ENST00000528847 CCL14Q16627 93 aa12.62□□□□□ -0.39
RPS3-211ENST00000528847 ZNF280CQ8ND82 737 aa12.62□□□□□ -0.39
RPS3-211ENST00000528847 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
RPS3-211ENST00000528847 MORF4L1Q9UBU8 362 aa12.62□□□□□ -0.39
RPS3-211ENST00000528847 TBC1D12O60347 775 aa12.61□□□□□ -0.39
RPS3-211ENST00000528847 BTDP43251 543 aa12.61□□□□□ -0.39
RPS3-211ENST00000528847 ATP2B3Q16720 1220 aa12.61□□□□□ -0.39
RPS3-211ENST00000528847 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
RPS3-211ENST00000528847 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
RPS3-211ENST00000528847 SIL1Q9H173 461 aa12.61□□□□□ -0.39
RPS3-211ENST00000528847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
RPS3-211ENST00000528847 TXNRD2Q9NNW7 524 aa12.61□□□□□ -0.39
RPS3-211ENST00000528847 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
RPS3-211ENST00000528847 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
RPS3-211ENST00000528847 ADORA1P30542 326 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 RHBDL3P58872 404 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 Q3C1V9 767 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 ZNF384Q8TF68 577 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 USP6NLQ92738 828 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
RPS3-211ENST00000528847 NUDT12Q9BQG2 462 aa12.6□□□□□ -0.39
RPS3-211ENST00000528847 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
RPS3-211ENST00000528847 MAST2Q6P0Q8 1798 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
RPS3-211ENST00000528847 CAP2P40123 477 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 PABPC4Q13310 644 aaKnown RBP eCLIP12.59□□□□□ -0.396e-67■■■□□ 18.3
RPS3-211ENST00000528847 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
RPS3-211ENST00000528847 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 RBPJLQ9UBG7 517 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 ABCF2Q9UG63 623 aa12.59□□□□□ -0.39
RPS3-211ENST00000528847 LTBP2Q14767 1821 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 SEMA3EO15041 775 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 JAG1P78504 1218 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 RASGRF1Q13972 1273 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 DZIP1Q86YF9 867 aaKnown RBP12.58□□□□□ -0.4
RPS3-211ENST00000528847 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
RPS3-211ENST00000528847 MAFAQ8NHW3 353 aaPredicted RBP12.58□□□□□ -0.4
RPS3-211ENST00000528847 PORCNQ9H237 461 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
RPS3-211ENST00000528847 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
RPS3-211ENST00000528847 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
RPS3-211ENST00000528847 TIMM10P62072 90 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 HERVK_113P62684 666 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 MECOMQ03112 1051 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 SHHQ15465 462 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
RPS3-211ENST00000528847 MORN1Q5T089 497 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
RPS3-211ENST00000528847 GPRC5AQ8NFJ5 357 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 MYLIPQ8WY64 445 aa12.57□□□□□ -0.4
RPS3-211ENST00000528847 LBHD1Q9BQE6 289 aaPredicted RBP12.57□□□□□ -0.4
RPS3-211ENST00000528847 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
RPS3-211ENST00000528847 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
RPS3-211ENST00000528847 BACE1P56817 501 aa12.56□□□□□ -0.4
RPS3-211ENST00000528847 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
RPS3-211ENST00000528847 MTMR2Q13614 643 aa12.56□□□□□ -0.4
RPS3-211ENST00000528847 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms