RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SYNE3Q6ZMZ3 975 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 CCDC80Q76M96 950 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 NT5DC4Q86YG4 428 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 MYRIPQ8NFW9 859 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 CDHR1Q96JP9 859 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 ZNF512BQ96KM6 892 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 NEUROD6Q96NK8 337 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 UIMC1Q96RL1 719 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 BAG1Q99933 345 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 CRACR2AQ9BSW2 395 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 KLF15Q9UIH9 416 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 PRAMEF22A3QJZ6 481 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 GLTPD2A6NH11 291 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 SLC27A2O14975 620 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 ERLIN1O75477 346 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 REC8O95072 547 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 LDHCP07864 332 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 HNRNPCP07910 306 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC3-216ENST00000523088 RDXP35241 583 aaKnown RBP8.68□□□□□ -1.02
HDAC3-216ENST00000523088 ZNF131P52739 623 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 SH3BGRP55822 239 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-216ENST00000523088 CCDC173Q0VFZ6 552 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 BECN1Q14457 450 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 TERF2Q15554 542 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 PKN1Q16512 942 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 LEKR1Q6ZMV7 388 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 PPP1R42Q7Z4L9 355 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 RTKN2Q8IZC4 609 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-216ENST00000523088 NEK9Q8TD19 979 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 PLEKHG4BQ96PX9 1271 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 PPP1R9BQ96SB3 815 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 MAP3K14Q99558 947 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 ZHX3Q9H4I2 956 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 PRKRIP1Q9H875 184 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-216ENST00000523088 SPC25Q9HBM1 224 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 ITM2BQ9Y287 266 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 DIS3Q9Y2L1 958 aaKnown RBP8.68□□□□□ -1.02
HDAC3-216ENST00000523088 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
HDAC3-216ENST00000523088 TLDC2A0PJX2 215 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 MTRF1O75570 445 aaKnown RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 VEGFAP15692 232 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 RPS6KA3P51812 740 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 CRY2Q49AN0 593 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 NAALADL2Q58DX5 795 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 CEP350Q5VT06 3117 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 CDC37L1Q7L3B6 337 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 CCDC34Q96HJ3 373 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 RNPC3Q96LT9 517 aaKnown RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 RPAP3Q9H6T3 665 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 CASS4Q9NQ75 786 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 MIS18AQ9NYP9 233 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 PCSK1NQ9UHG2 260 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 SFMBT1Q9UHJ3 866 aa8.67□□□□□ -1.02
HDAC3-216ENST00000523088 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
HDAC3-216ENST00000523088 IQCA1LA6NCM1 817 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 NFKBIEO00221 500 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 KIAA0754O94854 1291 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 MYL6BP14649 208 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 GJA8P48165 433 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 PIP4K2AP48426 406 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 POSTNQ15063 836 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 FXNQ16595 210 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 TBC1D25Q3MII6 688 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 HHATQ5VTY9 493 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 TTC19Q6DKK2 380 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 KCNV1Q6PIU1 500 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 SPATS2Q86XZ4 545 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 SAMD14Q8IZD0 417 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 FAM76AQ8TAV0 307 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 RPGRQ92834 1020 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 CENPTQ96BT3 561 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 BICD1Q96G01 975 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 RSRC1Q96IZ7 334 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 DUSP9Q99956 384 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 THUMPD2Q9BTF0 503 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 ALDH8A1Q9H2A2 487 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 NMRK2Q9NPI5 230 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 C6orf203Q9P0P8 240 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 DKK3Q9UBP4 350 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 TMEM98Q9Y2Y6 226 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
HDAC3-216ENST00000523088 IVNS1ABPQ9Y6Y0 642 aa8.66□□□□□ -1.02
HDAC3-216ENST00000523088 PLIN1O60240 522 aa8.65□□□□□ -1.02
HDAC3-216ENST00000523088 MMEP08473 750 aa8.65□□□□□ -1.02
HDAC3-216ENST00000523088 ZNF24P17028 368 aa8.65□□□□□ -1.02
HDAC3-216ENST00000523088 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDAC3-216ENST00000523088 RAD51AP2Q09MP3 1159 aa8.65□□□□□ -1.02
HDAC3-216ENST00000523088 SYCP1Q15431 976 aa8.65□□□□□ -1.02
HDAC3-216ENST00000523088 HLFQ16534 295 aa8.65□□□□□ -1.02
HDAC3-216ENST00000523088 ATP2B3Q16720 1220 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms