RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 MCAMP43121 646 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 SARSP49591 514 aaKnown RBP22.29■■□□□ 1.16
HMG20B-213ENST00000488973 TTF1Q15361 905 aaPredicted RBP22.29■■□□□ 1.16
HMG20B-213ENST00000488973 ARFGAP3Q9NP61 516 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 FAM217BQ9NTX9 383 aaPredicted RBP22.29■■□□□ 1.16
HMG20B-213ENST00000488973 GOLGA8AA7E2F4 631 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 FOXN1O15353 648 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 UBE3CQ15386 1083 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 JAKMIP3Q5VZ66 844 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 NOSTRINQ8IVI9 506 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 LY9Q9HBG7 655 aa22.29■■□□□ 1.16
HMG20B-213ENST00000488973 RIC1Q4ADV7 1423 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 B4E1Z4 1266 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 POLR3GO15318 223 aaPredicted RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 CSF1RP07333 972 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 HNRNPH2P55795 449 aaKnown RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 TCIRG1Q13488 830 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 MORC3Q14149 939 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 SLC9C2Q5TAH2 1124 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 NUTM2AQ8IVF1 878 aaPredicted RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 TXLNBQ8N3L3 684 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 WASF1Q92558 559 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 SENP2Q9HC62 589 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 LIFRP42702 1097 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 ADKP55263 362 aaKnown RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 FMR1Q06787 632 aaKnown RBP eCLIP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 SSRP1Q08945 709 aaKnown RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 TRIM28Q13263 835 aaKnown RBP22.28■■□□□ 1.16
HMG20B-213ENST00000488973 NFXL1Q6ZNB6 911 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 GOLGA1Q92805 767 aa22.28■■□□□ 1.16
HMG20B-213ENST00000488973 LRP6O75581 1613 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 ERVV-2B6SEH9 535 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 PTPREP23469 700 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 OAS2P29728 719 aaKnown RBP22.27■■□□□ 1.16
HMG20B-213ENST00000488973 SMC1AQ14683 1233 aaKnown RBP22.27■■□□□ 1.16
HMG20B-213ENST00000488973 SMARCE1Q969G3 411 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 EPC1Q9H2F5 836 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 RAI14Q9P0K7 980 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 FMNL1O95466 1100 aaPredicted RBP22.27■■□□□ 1.16
HMG20B-213ENST00000488973 PCCAP05165 728 aaPredicted RBP22.27■■□□□ 1.16
HMG20B-213ENST00000488973 NR1I3Q14994 352 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 PARD6BQ9BYG5 372 aa22.27■■□□□ 1.16
HMG20B-213ENST00000488973 FBXO2Q9UK22 296 aaPredicted RBP22.27■■□□□ 1.16
HMG20B-213ENST00000488973 TMEM67Q5HYA8 995 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 ZNF579Q8NAF0 562 aaKnown RBP22.26■■□□□ 1.15
HMG20B-213ENST00000488973 SLC26A6Q9BXS9 759 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 KCNG1Q9UIX4 513 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 COL5A2P05997 1499 aaPredicted RBP22.26■■□□□ 1.15
HMG20B-213ENST00000488973 GPS2Q13227 327 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 NID2Q14112 1375 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 SAFBQ15424 915 aaKnown RBP eCLIP22.26■■□□□ 1.15
HMG20B-213ENST00000488973 HSP90AA4PQ58FG1 418 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 KANK3Q6NY19 840 aa22.26■■□□□ 1.15
HMG20B-213ENST00000488973 POLR2DO15514 142 aaKnown RBP22.25■■□□□ 1.15
HMG20B-213ENST00000488973 MMP1P03956 469 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 IFNAR1P17181 557 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 TOB1P50616 345 aaPredicted RBP22.25■■□□□ 1.15
HMG20B-213ENST00000488973 ALX1Q15699 326 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 RILPL1Q5EBL4 403 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 DHX58Q96C10 678 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 PANX2Q96RD6 677 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 SERTAD1Q9UHV2 236 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 RIPOR2Q9Y4F9 1068 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 PCDH11XQ9BZA7 1347 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 PCDH11YQ9BZA8 1340 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 CCDC175P0C221 793 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 ERCC5P28715 1186 aaPredicted RBP22.25■■□□□ 1.15
HMG20B-213ENST00000488973 TXLNAP40222 546 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 METTL24Q5JXM2 366 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 SPECC1Q5M775 1068 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 FUT8Q9BYC5 575 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 TAOK2Q9UL54 1235 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 SLC12A7Q9Y666 1083 aa22.25■■□□□ 1.15
HMG20B-213ENST00000488973 MYH3P11055 1940 aa22.24■■□□□ 1.15
HMG20B-213ENST00000488973 ABCA3Q99758 1704 aa22.24■■□□□ 1.15
HMG20B-213ENST00000488973 A0A1B0GTH6 734 aa22.24■■□□□ 1.15
HMG20B-213ENST00000488973 CCDC151A5D8V7 595 aa22.24■■□□□ 1.15
HMG20B-213ENST00000488973 PRR29P0C7W0 189 aa22.24■■□□□ 1.15
HMG20B-213ENST00000488973 CT47A1Q5JQC4 288 aaPredicted RBP22.24■■□□□ 1.15
HMG20B-213ENST00000488973 CTR9Q6PD62 1173 aa22.24■■□□□ 1.15
HMG20B-213ENST00000488973 FOXP1Q9H334 677 aaPredicted RBP22.24■■□□□ 1.15
HMG20B-213ENST00000488973 BTBD18B2RXH4 712 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 BRD3Q15059 726 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 SPATA20Q8TB22 786 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 CCDC12Q8WUD4 166 aaPredicted RBP22.23■■□□□ 1.15
HMG20B-213ENST00000488973 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
HMG20B-213ENST00000488973 NAA15Q9BXJ9 866 aaKnown RBP22.23■■□□□ 1.15
HMG20B-213ENST00000488973 ZNF532Q9HCE3 1301 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 AKR1B15C9JRZ8 316 aaPredicted RBP22.23■■□□□ 1.15
HMG20B-213ENST00000488973 PLCD1P51178 756 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 MUM1L1Q5H9M0 696 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 MYL10Q9BUA6 226 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 PIH1D3Q9NQM4 214 aaKnown RBP22.23■■□□□ 1.15
HMG20B-213ENST00000488973 MYH6P13533 1939 aa22.23■■□□□ 1.15
HMG20B-213ENST00000488973 TNNT3P45378 269 aaPredicted RBP22.22■■□□□ 1.15
HMG20B-213ENST00000488973 DIS3L2Q8IYB7 885 aaKnown RBP22.22■■□□□ 1.15
HMG20B-213ENST00000488973 TRMT44Q8IYL2 757 aaKnown RBP22.22■■□□□ 1.15
HMG20B-213ENST00000488973 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms